CI01000005_07436839_07437813


Basic Information

Item Value
gene id CI01000005_07436839_07437813
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7436065 ~ 7438424 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_07436839_07437813.mRNA
AGATGCATCTATTGACATTGGGGCGCTGGAACCAGAAGTTGATCACTGATAGATGTGCTTCCGAAGTGTGTGTGTGTGTGTGCGCGCGCGCGCGTTTTTGTGATTTATGAGGACACAAATTTGTATAATGACATGGGTATTACACTGGTATTACGATGTAAACATGAAATATGAGGACATTTCATGAGTCCTCGTATTTAAAATAGCTTTAAAAACATACTAAACAATGTTTTATTAAAAATGTAAAAATGCAGACAGTTTTCTGTGATGGGAAGGTTTAGTGTAGGGGAATAGAATATAAAGTTTGTACAGTAGGCTATAAAAATCTATGGAAAGTCCGGGCCATAAACCATGGAACATGTAGTTATTTGCATGGAGTGATGGTCGGTATTTACTTCCGTCTAGTGTAGAAACGCGTATCAGATCAGGATCAACTGGCTCTTAAAACCATCCAGTCCAGGCTCCTCCCCTTAGGAACATCCTTAATTAGCGAATTTCTGTTTCCAGTTCTGGCTCTTCTACACTCCAAGTGCTTTTTCTTACATAGGATGTCCTGACATCGCCTGACCTTTATTTTTAAACAAACTCACGCTGCGGTTTGATAAAGCGACATGGATCAGAAAGAATCAACGGCGCTGCAAAAACTGAGTTCATTCAGTATCAAAAGTCTACTGCTTCCATCTAAAAGTGAGAAACACGACACGACACTTCCAGAGAAGAACAAACCGCTGTCGGGCACCGACCCGAAACGATCTCCGGAGCCCACCGGGATGGAGTCCGACTCAGAGAAAGTCAAAGATGCAGAAGAACCCAACAAAACTGTGAAGCTCGACAAACCGCCGTTCAGCTACAACGCGCTGATTATGATGGCAATTAGACAAAGCCCGGAGAAGAGACTAACGCTTAACGGAATCTACGAATTCATCATGAAGAACTTTCCATTTTACCGGGAGCACAAGCAGGGGTGGCAGAATTCCATTCGACACAATTTGAGTCTCAATAAATGCTTTGTTAAAGTGCCGAGACATTACGACGACCCGGGGAAAGGCAACTACTGGATGTTGGACCCTTCGAGCGATGATGTTTTTATCGGCGGTACGACGGGCAAACTCCGGAGACGCTCGGCGACTTCTAGAGGAAAGCTGGCTATTAAGCGAGGACTTCGATTTTCCCCTTTGGGCTTGGGAATAAATGAAACGGCGAATAATCCCCTATACTGGCAAATATCGCCTCTATTATCTTTACACCATCCACATTACAACGGGACGTCGCACGGATTTCTGAATCAAGGTCATGGTTACAGTTCTTTCGTCCCTGGAATAGAGCATTTGGGCAGCCGGGATGCGACTCGACCCATTCTAGGGAGTTCTAGCGGTTACGGAATGAGTTCTTCTCCCGTCGGGTTATTGTCCGTCCCGTCAGGATACTTGCACCCACCGGGCCTTCAGCAAAACGCCTTCAGCTCTCAGCAGACATTACTTACCGACACCCTAAGGACATCTTTCTCATCGTTCTCACCTGCTGTTTCCAGTGGCTTACCAGGAGTTTTGTCCCATCAAGACAGAGTTTCCCCAGATTCATTTTAAACTGATGAGGAAGTGATTTCGCCGAATGCGATGAAATCACAATTATGGAAGCTTGTTTCCGCCACTGAATAAAAAAAGGTAATTGCGACTCTTTATTTGACAATTATGACTTTATTTCTTGCAATTGCGAGTTCAGCCATTTCGCAATTCGGACGCAGTTCCGAGTTGAAGCCTATATCTCAGAATTCTGACTTACTTTTCGCCATATTGTGTGACAAACTCGGAATTGCGAGAAAAAAAAAAAGTCGGAATTGTGAGATAAACCCATTTTCCGTTTCGGAAATAAGCTTCCATATAGACTAAATGCTTCCATATACAATTTTATGATCGAAATTTCATTTTTATGTGCTTCGAAAGCGCAAGCTTTCTTACCTTTTGGTGGAAAAATTGCCAAAGGTTAATGCGATTTAACTCCAGACTATTTATATAACGTTCGAAGTAAAGCTAATTTATGTTTTATTTCTTAAATGTATTTGATGTCATTGTATTCATCCATGATCCATTATTATGCAGTCCTACTGACATTATATATGTTGCGGGTCTCGACAGTGAACTCAACTGGAGTCTGTGAGAGACACTCACTAAGACTTTCATTCATCTTCATTTTCTCAGGTCTGATACAGTCTGCAGACACACACTATAATGAAATATGGGATGTATGATAATGTGGAGCTCACAGCGGCATGCATGTCAATCAGTGTTTAATCTACAAACAGTCCCATAGTGATGTTAGCACGTCTTTGACCCGTACTTTATTCTTCTTTTTCAAATAAA

Function

NR:

description
Zgc:85969

GO: NA

KEGG:

id description
K09385 FOXG; forkhead box protein G

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_07436839_07437813.mRNA True 2360 mRNA 0.42 1 7436065 7438424

Neighbor

gene id symbol gene type direction distance location
CI01000005_07398684_07399164 MPC1.S, MPC1, MPC1.L coding downstream 36901 7398487 ~ 7399164 (-)
CI01000005_07373961_07374634 NA coding downstream 61431 7373410 ~ 7374634 (-)
CI01000005_07355833_07360372 NA coding downstream 75693 7355833 ~ 7360372 (-)
CI01000005_07190084_07218097 NA coding downstream 217932 7189596 ~ 7218133 (-)
CI01000005_07143500_07144465 NA coding downstream 291500 7143482 ~ 7144565 (-)
CI01000005_07591912_07592984 NA coding upstream 153488 7591912 ~ 7592991 (-)
CI01000005_07593934_07596058 RPS27A, DENND5B coding upstream 155502 7593926 ~ 7596058 (-)
CI01000005_07617632_07620944 NA coding upstream 179141 7617565 ~ 7620944 (-)
CI01000005_07622471_07624184 NA coding upstream 182916 7621340 ~ 7624184 (-)
G40566 NA non-coding downstream 8153 7427699 ~ 7427912 (-)
G40564 NA non-coding downstream 10099 7425711 ~ 7425966 (-)
G40543 NA non-coding downstream 43343 7385460 ~ 7392722 (-)
G40553 NA non-coding downstream 66863 7368986 ~ 7369202 (-)
G40551 NA non-coding downstream 70911 7364797 ~ 7365154 (-)
G40580 NA non-coding upstream 20397 7458821 ~ 7468238 (-)
G40585 NA non-coding upstream 43099 7481523 ~ 7481722 (-)
G40586 NA non-coding upstream 45900 7484324 ~ 7484523 (-)
G40602 NA non-coding upstream 162121 7600545 ~ 7602965 (-)
G40604 NA non-coding upstream 167625 7606049 ~ 7606279 (-)
G40487 NA other downstream 239637 7195795 ~ 7196428 (-)
CI01000005_06481721_06483251 NA other downstream 952576 6481355 ~ 6483265 (-)
G39515 NA other downstream 1601526 5833792 ~ 5834539 (-)
G38415 NA other downstream 3034955 4381238 ~ 4401110 (-)
G38510 NA other downstream 3229857 4204845 ~ 4206208 (-)
G40540 NA other upstream 87797 7526221 ~ 7532148 (-)

Expression


Co-expression Network