CI01000005_07143500_07144465


Basic Information

Item Value
gene id CI01000005_07143500_07144465
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7143482 ~ 7144565 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_07143500_07144465.mRNA
ATAATATGGCTAGACATAGAACAGTCACTCTGAAAACTTGCACATATCAGACATCCCATTTCTCAGTCAGTCCATTAAACATCACCCATGCTTCAAAGCAATGACAATAGCTTCTGCTCTGACAGCCTGGTGTAAATATAATCAAATCACAAACTCCAATCAGGCCCCATCTAAACTCACCCCACCCTGGAACAACCCTGATTTCACAAGCAACAAAAAAACACTCAATTTCCATAAATGGGCAGAAAAGGGCATCACACATATTAATCACATTTTTCAGTCTAACAACTTTGTTTCATTTTCCTACTTAGTTCAGGAGTACGGTATCGGGAACAATCAATTCTTGAATTATTTGCAACTCAAATCAGCTGTTTTATCCAAAATCAACAATAGAACCATCAACCTTCACCTTCCTTCTGCATTAACAGATTTAGTTAATATATCCTCCCCGAAAAAATTGCTTTCCAAAATATACAAAATTATAACCAATTCAAATAAAACCATAACTTTACCAACAATCAAATGGGAAGAAGACCTTTCGATTGCTCCTGAGACCGACTTCTGGACTCAAATTTGTAAAAATATTTATTCCATGACTAAAAACGCCAACCTTCAGCTCATACAGTATAAGACTCTTCATAGAACACACTACACTGGGGAAAGGTTGTCTAAAATGGGATTCACATCAGAAACTTGCTCGCACTGCTCACAAAATCGTCTGGACACATATATCCACTCCACATGGCACTGCCCACCCATTAAACACTTTTGGAAAGACGTCACTGAATCCCTATCTCGCCTCCTGGGCTGCCGCATCCCATTATCCCCCTTACTCTGTCTACTGGGCGATCTATCAACCCTCAATCAGGAAATAACAAACAAAAGGATGCTCCTCGTAGCCTTAGTCATCTTCTTGAACTGGAAATCCCGAAACACTATTCACATAATGCATTGGAAAAATTTGCTCACAGACTACATCTCCCTAGAATATTTTTCACCTCATTACAACTGTATATCAGAACCACAACACTCCAGATCAGACCTCATTCAACTATTACAAATCTGACACACTCATCCTAATTAA

Function

NR:

description
reverse transcriptase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_07143500_07144465.mRNA True 1084 mRNA 0.39 1 7143482 7144565

Neighbor

gene id symbol gene type direction distance location
CI01000005_07111233_07112234 NA coding downstream 31216 7110722 ~ 7112266 (-)
CI01000005_07093538_07094533 NA coding downstream 48913 7093482 ~ 7094569 (-)
CI01000005_07052874_07068345 NA coding downstream 75105 7052730 ~ 7068377 (-)
CI01000005_07035672_07037203 NA coding downstream 106206 7034777 ~ 7037276 (-)
CI01000005_07018058_07025374 LGI1A, LGI3 coding downstream 118108 7016841 ~ 7025374 (-)
CI01000005_07190084_07218097 NA coding upstream 45031 7189596 ~ 7218133 (-)
CI01000005_07355833_07360372 NA coding upstream 211268 7355833 ~ 7360372 (-)
CI01000005_07373961_07374634 NA coding upstream 228845 7373410 ~ 7374634 (-)
CI01000005_07398684_07399164 MPC1.S, MPC1, MPC1.L coding upstream 253922 7398487 ~ 7399164 (-)
CI01000005_07436839_07437813 NA coding upstream 291500 7436065 ~ 7438424 (-)
G40403 NA non-coding downstream 52588 6993317 ~ 7090894 (-)
G40402 NA non-coding downstream 78182 7060587 ~ 7065300 (-)
G40408 NA non-coding downstream 143610 6999253 ~ 6999872 (-)
G40407 NA non-coding downstream 145139 6997582 ~ 6998343 (-)
G40382 NA non-coding downstream 197910 6943111 ~ 6945572 (-)
G40472 NA non-coding upstream 10796 7155361 ~ 7155615 (-)
G40497 NA non-coding upstream 75446 7220011 ~ 7220359 (-)
G40499 NA non-coding upstream 78042 7222607 ~ 7222893 (-)
G40503 NA non-coding upstream 87041 7231606 ~ 7231852 (-)
G40518 NA non-coding upstream 139156 7283721 ~ 7284935 (-)
CI01000005_06481721_06483251 NA other downstream 659993 6481355 ~ 6483265 (-)
G39515 NA other downstream 1308943 5833792 ~ 5834539 (-)
G38415 NA other downstream 2742372 4381238 ~ 4401110 (-)
G38510 NA other downstream 2937274 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 5254206 1883222 ~ 1899867 (-)
G40487 NA other upstream 51230 7195795 ~ 7196428 (-)
G40540 NA other upstream 381656 7526221 ~ 7532148 (-)

Expression


Co-expression Network