CI01000005_07190084_07218097


Basic Information

Item Value
gene id CI01000005_07190084_07218097
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7189596 ~ 7218133 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_07190084_07218097.mRNA
ACAGAGTCTGCTCTCCAAAATAGATCTATCATAGAAATGTCTAACTGGGGAGTGACAAACGCAGATAATCAAACCATCCAATACTGCTTTCCAAACAACAATTTGTCTTGTTCCAAGAGTATCCGACCTGAAGTGGAGTATATTTTTGTGTACATTTTCGTTGCTGTAACATCAGTGTTCACCGTGTTTCTGAACCTGTTGGTGATCATCTCCATCTCACACTTCAAGCAGCTCCACACTCCCACCAATGTGCTGATCCTCTCTCTGGCAGTGGCTGATCTGATCATAGGACTGATTCTCATGCCAGTGCAGGGAATGAAACTGGTTGAGCCATGCTGGTACTTTGGAGAAATATTTTGCTCAATATTTCCTCTTATTCTTTATGTGGTTCTTACAGCATCTCTTGGTAATTTGGTTATTATATCCGTGGATCGATACATTGCTGTGAATGACCCTTTGCGATATCCAATGAAGGTCAATAATTACAGAGTTGTTGTTTCTATTGTTGTAAACTGGATATTCTCCTTCATATATAATTTTTATCTGTTGTATGAGTTTTTACTGTATCCAGAGAGGAACCACACATGTATTGGAGAATGCATACTTTCTGTGAAGTTGGAAAACATAATACTAGATGCTTTTGTTTGTTTAGTGGTACCTTGTTGTATAATTGTTTCTTTATATGTAAAAATCTGCTTTGTAGCAAACTATCAAGCGAAGCATTTAAATTCAGTCACAGACAAAAAGGCCAGATCAGAAAAAAAGGCTGCAAGAACCTTAGGGATTGTAGTACTGGTTTATCTTCTTTGCTGGATGCCGTACTATTTAACTACTCTTTCTGTTGGGCATGATGAAAATGACACACTGTTAATTAATGTAATGTATTGGATTTTATGCATGAATTCCTTAATACTCAAAATCAGAAAAACAACAACAGTTCTGATAGAATGCTCAGATGGTACTCAGTTCACTCAAAAGTACATTACAGATGTTTCATTCCATATCAGATATTTCCAGTTCACATACCTGAGTGAGATTCACAACCCCAAAGTTAAAGTTTTACCTCACAGTAGAACTGGGCTGGTGTTGGAGTGTCCAGATATGGCAGGTGAAGAAAAACTCACAGTATCTCAGCTCCCTTCAGTAGAAGATGAACACCCGTGCCAACACACCATCTCCGCTAGCACGATGAGCAATGCCCCTCCTGGGAAGGAAAGCCAAGGCTACCATGTCAACCTCATCAAGAAATGGCACAAGAAAATGCCTGAGGGGGAGAGGGCCTTGATAGCATGCAAGGTGTCCCCAAAAGATGTGGGAGATGACGACCAAGTGGATGATGAGGCTGTGAAACATTCCCAAGCAGTGGAACGTTGCAAAGCGCTAAATGGCTGTGAGGGAGAGCGGATGCGCCAGACTCCGGAGTGTGGTGATCTTCAAATCGCGCCGCCACCAGCGTTCTATCTAAGATCAGGCAAAAAGTAAACAGTAAGGGAAAACAATTCCTCATAAATTTCTTTCCAAAGAGACCAATTGAGAACCTATACTGTTCGAGCAAGGCGACGTTGCCGCTGTTTACGTTGTGTAAATAGATGCTTGTTGAACTGGAGTCTGCCTTTTCCTACATAATGAGAAACAACTTGTTTCTAAGCCGGTAATAAGCACTCTTATCATACTCTAATCACTGAAGTAACACGAAAACGAAAAATATATAAAAATTGGCCATCTCAGTAACAGTCATGGAAGATTAAATTAATATCACAGGTGTCATTTTTCTACCATGTATACTATTCAGCAAATATTCTTAAACTATACACATATTATGAAAGCATAATATCAGACATGTAGCCTAATATATGGCTCAGCATAATATCAATCCTGTGTTCATCATGCTTGTAGAGGTACCTACAATGTTAAATAGTTTAGAAAGATTGTAATGTTTTGGAATACAAGGCACAATGTCTGTTAATAAA

Function

NR:

description
Taar9 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_07190084_07218097.mRNA True 1970 mRNA 0.39 5 7189596 7218133

Neighbor

gene id symbol gene type direction distance location
CI01000005_07143500_07144465 NA coding downstream 45031 7143482 ~ 7144565 (-)
CI01000005_07111233_07112234 NA coding downstream 77330 7110722 ~ 7112266 (-)
CI01000005_07093538_07094533 NA coding downstream 95027 7093482 ~ 7094569 (-)
CI01000005_07052874_07068345 NA coding downstream 121219 7052730 ~ 7068377 (-)
CI01000005_07035672_07037203 NA coding downstream 152320 7034777 ~ 7037276 (-)
CI01000005_07355833_07360372 NA coding upstream 137700 7355833 ~ 7360372 (-)
CI01000005_07373961_07374634 NA coding upstream 155277 7373410 ~ 7374634 (-)
CI01000005_07398684_07399164 MPC1.S, MPC1, MPC1.L coding upstream 180354 7398487 ~ 7399164 (-)
CI01000005_07436839_07437813 NA coding upstream 217932 7436065 ~ 7438424 (-)
CI01000005_07591912_07592984 NA coding upstream 373779 7591912 ~ 7592991 (-)
G40472 NA non-coding downstream 33981 7155361 ~ 7155615 (-)
G40403 NA non-coding downstream 98702 6993317 ~ 7090894 (-)
G40402 NA non-coding downstream 124296 7060587 ~ 7065300 (-)
G40408 NA non-coding downstream 189724 6999253 ~ 6999872 (-)
G40407 NA non-coding downstream 191253 6997582 ~ 6998343 (-)
G40497 NA non-coding upstream 1878 7220011 ~ 7220359 (-)
G40499 NA non-coding upstream 4474 7222607 ~ 7222893 (-)
G40503 NA non-coding upstream 13473 7231606 ~ 7231852 (-)
G40518 NA non-coding upstream 65588 7283721 ~ 7284935 (-)
G40520 NA non-coding upstream 67181 7285314 ~ 7287242 (-)
CI01000005_06481721_06483251 NA other downstream 706107 6481355 ~ 6483265 (-)
G39515 NA other downstream 1355057 5833792 ~ 5834539 (-)
G38415 NA other downstream 2788486 4381238 ~ 4401110 (-)
G38510 NA other downstream 2983388 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 5300320 1883222 ~ 1899867 (-)
G40540 NA other upstream 308088 7526221 ~ 7532148 (-)

Expression


Co-expression Network