G36525


Basic Information

Item Value
gene id G36525
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 1878561 ~ 1879486 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU41489
ATAATTTCAGTACTGTAAAATGTTTTAATAATATCATTCTTTCAGCATCACTCTTATAAAGTCATTGAACAATGAGATTTTCAAAATAATGCGGTTTATAGTACAATGGAAACTGCTTGTCAGCTGGATGCCACTAATTCAGTCTATAGTGGAGACTGGGACACATGGACACCTTTGAGAACAGGAGTGCAAATAGGGAGCTTTTTGCTTAAGTAATGAGTGTTTAAAAAGTCAAAGTTGAATATATCATATGAATTATCTGAGTCCCAACATTCATTTCAGATAGGAACTCATGGCACTCGAGGATGACCTCTCACTGTTGTTTTCACATGCCAGTTACATTCTAGTGTATGCAGAATTGTGCATCCAACTCCAAAACTTGCAAATAGCAAGAAATAAATAAAAGATAGCAAGCTCTGTCTGGATGTTGAGTAGAGTTGCAGGTGGGCACAGAAGGCCGAATGCACGAGCAGTAGTCATTGTAGCATGCGTGTTATCAGATGTGCCTTCCAAAGGAGTTTATCCTTTAATGATTAATTATACCCCATATGGAGCTCAACATGAGGGGATGGCCGTCTCAGCAGTTACTGCTGTTTCGGCATGGCAAAGTCCCAGGCAGTATCCTGGGCGCACTTCCACATGGCGCGCACCAGCCGGGTGAAACCCATATCCTTGGGCTTCTCCAGCCCACGCATCAGCCGCTGTTTCATGATGGCAATAAACTCCTTATTACTCAGCTCCCCATTTCCTAAAAAAGAGTGAATGAAATAGAGTGTGAGAGAGAAATATGATGGGTAATTATCACCATCAGTGGCACCCAACACCAGAATTTAAAGTACTGATTCAGCGGGTCCGGTGTAATTGTACTTGTACTTGTGAAAATGCTTCCATACCACAATATGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41489 True 905 lncRNA 0.39 2 1878561 1879486

Neighbor

gene id symbol gene type direction distance location
CI01000005_01761513_01769840 NA coding downstream 108710 1761187 ~ 1769851 (-)
CI01000005_01723641_01729676 NA coding downstream 148225 1723338 ~ 1730336 (-)
CI01000005_01677318_01687512 MCU coding downstream 190962 1677161 ~ 1687599 (-)
CI01000005_01674196_01674495 NA coding downstream 204066 1673439 ~ 1674495 (-)
CI01000005_01648294_01654249 OIT3 coding downstream 224312 1647991 ~ 1654249 (-)
CI01000005_01883894_01899867 NA coding upstream 3736 1883222 ~ 1899867 (-)
CI01000005_01924855_01938284 NA coding upstream 45192 1924678 ~ 1938284 (-)
CI01000005_01944678_01957016 NA coding upstream 64475 1943961 ~ 1957016 (-)
CI01000005_02163205_02167196 NA coding upstream 282942 2162428 ~ 2167196 (-)
CI01000005_02240553_02245892 NA coding upstream 360351 2239837 ~ 2246835 (-)
G36640 NA non-coding downstream 99475 1778873 ~ 1779086 (-)
G36631 NA non-coding downstream 110214 1767923 ~ 1768347 (-)
G36535 NA non-coding downstream 157965 1705218 ~ 1720596 (-)
G36630 NA non-coding downstream 213415 1664878 ~ 1665146 (-)
G36626 NA non-coding downstream 216389 1661968 ~ 1662172 (-)
G36523 NA non-coding upstream 34359 1913845 ~ 1917676 (-)
G36517 NA non-coding upstream 42929 1922415 ~ 2001557 (-)
G36690 NA non-coding upstream 136783 2016269 ~ 2016491 (-)
G36692 NA non-coding upstream 138933 2018419 ~ 2018633 (-)
G36628 NA other downstream 214282 1663267 ~ 1664279 (-)
G36049 NA other downstream 834889 1021295 ~ 1043672 (-)
G38510 NA other upstream 2325359 4204845 ~ 4206208 (-)
G38415 NA other upstream 2501752 4381238 ~ 4401110 (-)
G39515 NA other upstream 3954306 5833792 ~ 5834539 (-)
CI01000005_06481721_06483251 NA other upstream 4601203 6481355 ~ 6483265 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00002745 micu1,LOC107754762,LOC107702683 coding CM030139.1 CM030139.1 841258 ~ 843720 (-)
tiger barb (Puntius tetrazona) G96069 NA non-coding NC_056711.1 CM032080.1 23115994 ~ 23184626 (+)
mexican tetra (Astyanax mexicanus) G105115 pou2f1 non-coding NC_035908.1 CM008311.1 20168770 ~ 20187834 (-)