CI01000005_02163205_02167196


Basic Information

Item Value
gene id CI01000005_02163205_02167196
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 2162428 ~ 2167196 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_02163205_02167196.mRNA
ATGACCGACAAGAGAAACATCGGTGTGCGACATATATCAGACGCGAGAGAAAGTCGGAGCAGAACTCACAAACTTCCCGAGAAGAAAATGAAAACAAAGACACGAATGATCGGACTCAAACAATCACAGTCTCCGTCTTATCCCACTCCATACAACTGTCGCAAAGGAGGAGGAGATGCGAAAGTCATTGAGATATCAGAAATTGTCAATAGGATTGCACCAAAAGTTGAGAAGTCTAAAGAAGGGGACTCAGTGCTCCAGTGGATTGGAGACAGTGCCATACCCTGCACTCCAGAGATCAGACAGCCCAGAGTCAGGAGGATCTCAGCACGGCAGAGCAGTGTTGAGGACCTCAAGAAACTTGCCAAGCAGTTTGACATCAATATGACTCGTCAGGACAAGGAGAAACAACAGGAGAGCACAGAAAAAAGAAATAAACTCAATAAGCTACAAAGTGATAGTACAGGGACAACGGAAAGACCAACATCTATCCCGGTCTCGTCGGAACAACTAACTGGATGCTCGTCTCTAGCCCGCCAAGAAGAGGAGGAGCTTCAGGCACTGTTTGATGGTCCCACGCAGCACATAAGTGGGAGGCTGAGCCCACCATCAGTAAACTGCACACCAGTAAGCAGTACTGAACCTTTAGCTCAGGCTGGACAGAGGTCATGTTCTGCAGCAACCAAAAACGCTCCTGTAGATACACCTAAAGCCGCTGAGGCGAAGTTTGATGATGACTGGGAAAATGATGACCTTCTGAATGACTCGTTTGTGTTGGAAATGACCCAGAACCCAGTGCCTTTGAATGTAGCTCAGAAACAGAGCACTGCTCAACCCGAGTCTTGCTCTAAGAAATGTAATTTTGAGGCCAAGGTTAATCCCTCTGTATCTAATGGCAGAAACATATGCTTTCAAACTCAACAGAGCACCACCAAAAGCAGCACCTTTACCAAGACACTTCCTGATGTCAAAACGTCTAATCGAAGCACTTTTACATTGAAGCCACCTGCTTCTGCCCAGAATCATACTACTGAGAAGCTGCTAAAGACTTCACCTGTGAACCAAGAAAAACAGCAAACACAGCCATCCCAGGGTACAAAACAAGTAGAGCTTGATAGAATGACCAAAGATTGCGGAGTTTCAAGTCAGACCTCTTCTCAGTTTGACGGGGTTTCAGAGGAGGACATGAAGTCTCTGTTTGATTCCGATGGTCTGTGGAATGACGAAGACGACGATGATCTCCTTTGTCAGGCTTGCGATGATGTGGAAAAGTTATCAGCCAGTCAAGAACAGCAAAGACTCAGTGAAGAGTACAAAAATCTTGCACATGACAAATCAAGAAGCATTGCATCTAAAGCACCTTCCTCTTCTGACACTATTTGTTCTCAGAACATGGGCAACAACAGCAGGGGCCAACCACGAGAACCCACACGCATATTTGCTCGCTCAAACTCAGTACCGTGTACAAGTGGCAGCTCTGGATTTAAACAGGGCTACGGTGTGTTATCGACAACTAAAAGTTCCAGCTCTGTATTGGGGAGTCATAGTGCTCAGCAATATGGACATGCACAAAACCAATCGAGTCATGTAGGATCCAGGCCTGGTTCTGCCAGATCCATGTACACCTCACAGACTGTTGTGCCACACAGCGCAACAGTAGGAAATGCTTCTAACTCCCACCATTACACGTTCAAAAGACATCTGTCTGACTCCATGACGCTAACCAACAAAGGTAAGCTTTGTACGTTGTGGCACCTGCAGCACATGACATTGCATCGTAGAATACTCCTACAGGAGATGACTGTAATAGGCAAGTTTGCTTAACCTGTTAAAAGAATAGTTCAAACATAAATGAAAATTGTGTCATTATTTACTCTCCCTCATGTTGATCCAAACCCGCATAACTTTCTTTCTTCCATGGAACATGAGAAAATGTTTTCAGAAATATTCGCAATGTTCTTTTCAATTCAGTGGAAGCACAAAACAAAGCACCATAAAATTATGATAACGGTAGTCCAGTAGATTTGTACAGTACATTCCAAATCTTTAACTGATGAAAATGTTGGTTAATGAAGCATTTTTTATAGTGACAACAAGAAAAAAGACAACGAAAAATGTGCATCATGACCATAATTAAATTATTTTAATTAAACCATACTGTTTAAGAAAATTACAAGAAAAAAATAGCACTACAATATATTAACATTGCACAATTTTTTTTTTTTTTTAAATAAAATTTAGAAGTAGTTTTATTGTTAAAATTAATCTAATCATGGTCAATAATTTTAGGAGTTCAATGAAATGATTGGAGCTGGGAGAACAGTGATTGAACACCAGTAAACTAAACTGGTGGGTTAACTAACCCAAATGCGCCCTGTACATATGAGATTAATCAATACATTACAGCTGAAATCTGCACATAATGACGCAAAAGCACAGGTGAGCGTAAACTTGAAATAATTGAATAACTAAATTATAAAGGACTCACTATATTTTATTTGCAATAGTATACTCATTTGAATGTTATTATGTAAATGCTGCTGCAGGTTTAAATTAATATATAAACTGTTTGAATATTTGGTTTAATTCTCATCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_02163205_02167196.mRNA True 2601 mRNA 0.41 4 2162428 2167196

Neighbor

gene id symbol gene type direction distance location
CI01000005_01944678_01957016 NA coding downstream 205412 1943961 ~ 1957016 (-)
CI01000005_01924855_01938284 NA coding downstream 224144 1924678 ~ 1938284 (-)
CI01000005_01883894_01899867 NA coding downstream 262561 1883222 ~ 1899867 (-)
CI01000005_01761513_01769840 NA coding downstream 392577 1761187 ~ 1769851 (-)
CI01000005_01723641_01729676 NA coding downstream 432092 1723338 ~ 1730336 (-)
CI01000005_02240553_02245892 NA coding upstream 72641 2239837 ~ 2246835 (-)
CI01000005_02312170_02375877 MEIS2, MEIS1 coding upstream 144974 2312170 ~ 2375877 (-)
CI01000005_02403966_02437498 NA coding upstream 236759 2403955 ~ 2437539 (-)
CI01000005_02619187_02639895 SPRED2B, SPRED2 coding upstream 450889 2618085 ~ 2639895 (-)
CI01000005_02669952_02699226 ACTR2B, ACTR2, ACTR2.S, ACTR2A coding upstream 501918 2669114 ~ 2699226 (-)
G36740 NA non-coding downstream 42769 2041337 ~ 2119659 (-)
G36741 NA non-coding downstream 117468 2043622 ~ 2044960 (-)
G36692 NA non-coding downstream 143795 2018419 ~ 2018633 (-)
G36690 NA non-coding downstream 145937 2016269 ~ 2016491 (-)
G36517 NA non-coding downstream 160871 1922415 ~ 2001557 (-)
G37511 NA non-coding upstream 123955 2291151 ~ 2291402 (-)
G37513 NA non-coding upstream 126505 2293701 ~ 2293961 (-)
G37468 NA non-coding upstream 213298 2380494 ~ 2382360 (-)
G37536 NA non-coding upstream 237998 2405194 ~ 2405446 (-)
G37544 NA non-coding upstream 247658 2414854 ~ 2415233 (-)
G36628 NA other downstream 498149 1663267 ~ 1664279 (-)
G36049 NA other downstream 1118756 1021295 ~ 1043672 (-)
G38510 NA other upstream 2037649 4204845 ~ 4206208 (-)
G38415 NA other upstream 2214042 4381238 ~ 4401110 (-)
G39515 NA other upstream 3666596 5833792 ~ 5834539 (-)
CI01000005_06481721_06483251 NA other upstream 4313493 6481355 ~ 6483265 (-)
G40487 NA other upstream 5028599 7195795 ~ 7196428 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location