CI01000006_03335446_03344286 (DPP3)


Basic Information

Item Value
gene id CI01000006_03335446_03344286
gene name DPP3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3334858 ~ 3344286 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_03335446_03344286.mRNA
TGTGGAGAGGAATCAAGCTGCCTAAGGACTGAAATGGTGGACTCTCAGTATTACCTCCCAAATGACATCGGGATCTCTGCTCTGGATTGCCGGGAGGCTTTCAGGCTGCTGTCTCCCAAAGAGCAACTGTATGCACACTACCTCTCTCGGGCATCCTGGTATGGTGGCCTGGCCGTGCTGATCCAGACGTCTCCAGAGTCTGCCAACATCTACGTACTGCTGCAAAAATTGTTTCGCGCACAGGCGCCACTGCAGCTGAAGGCAGCGGCTACTGCAGCTGGACTGAGCGCAGAGGAATATCAGGCCTTCCTTGTATATGCTGCTGGGATTTATGCAAATATGGGGAATTACAAGTCGTTTGGGGACACCAAATTCATCCCCAACCTACCAAAGGAGAAGTTCAAGGCTCTGGTGTGGGAGAGTCTGGCGTTTCAGGAGAGCCCCGGTGACATAGAGGCGCTGTGGGGCTCCTGCTCTGAGCCCCTCTACTCCCTAGAAGACAAGAAGAAACAGCTCGGTCTGGGTGAGAAGGGGATCACGACTTACTTCTCAGGGAACTGCTGCTTAGAAGATGCAGAGTTTGCCCAGAAATTTCTGGACTCCAAGAAACTGAGTGCCTACAACACCCGTCTGTTCAAGACTGAAATAGATGGCAAGCGGTGCTATGAGGTGCGTTTGGCATCTGCTGAGAAGGCGGACTGCTGTGATGCTGAGAAGGACGGTGAAAATTTTTGTGGCAGATATGAATTTGAGGATGCTGTGTTCTCTGTTAAGAGGGGCGATTATTCCTTCCTTATGGAGAAAGTGTGTCAGAACTTGGAGAAAGCCAAGGCTCATGCAGCCAATGAGAACCAGAAGAAGATGCTGGAAGAGTATATCCGCAGTTTCACCTATGGCTCAGTGGAAGCCCACAAAGAAGGGTCCCGTTATTGGATCAAAGACAAAGGACCTATTGTGGAGAGTTACATTGGATTTATTGAGAGCTACAGAGATCCATTTGGCTCAAGGGGTGAATTTGAAGGTTTTGTTGCTGTGGTGAACAAGGCCATGAGCGCTCGCTTTGCTCAGTTGGTGAGCTCAGCCGAGGTCTTGCTTCCAGAGCTGCCTTGGCCTCCAGCCTTTGAGAAGGACCGCTTCCTCAAGCCAGACTTCACCTCTCTGGATGTGCTTACCTTTGCCGGCAGCGGCATTCCTGCAGGAATCAACATTCCAAACTATGACGACATCAGACAGACAGAAGGTTTCAAGAATGTGTCCCTTGGGAATGTGCTGGCTGTTGCGTATGCCACGCAGAAAGACAAGCTCACCTTTCTTGAGGAGAATGACAAGGATCTGTACATCAAATGGAAAGGTCCCTCTTTTGAGGTGCAGGTTGGACTCCACGAGCTGCTGGGTCATGGCAGCGGGAAGCTCTTTGTTCAGGATGACAAGGGAAAATTCAACTTTGATCAAACTGCTGTTTGTAATCCAGAAACGGGGGAACTGATCTCGAGCTGGTACAAGGGCAGCGAGACATGGGACAGCAAGTTCTCCACCATCGCCTCGTCCTATGAGGAGTGTCGAGCTGAGTGTGTAGGTCTGTACCTATGTCTCAACAAACAGGTGCTCAGTATTTTCGGGCATGAAGGGGAGGATGCAGAGGAGGTGGTGTATGTAAACTGGCTGACCATGGTGCGTGCCGGCCTGCTGGGACTGGAGTTTTACACACCAGAGAGCAAGAGCTGGAGACAGGCTCACATGCAGGCCCGGTTTGTGATTTTGCGGGTTCTGCTGGAGGCTGGAGAAGGACTGGTTGGTCTGAAGGAGTGCACAGGGACAGATGGACGACCAGATGCTGTCATAACACTCGACCGCAGCAAGATCAACACAGTGGGCAAGAGCGCCATCCAGAGGTTCCTCTGTAAACTGCAGGTACATAAGTCCACAGCCGATGTAGAGGGAGGAAGGGCTCTGTATGAAGGCTACTCTGCTGTGACTGCTGATGGCACCCACGATTTCCTGCGCCTCAGAGAGACGGTTCTGCTCCGTAAGGAAGCTCGTAAGATGTTTGTCCAAGCTAATACCTACATCAAAGATGATGCTGTGGAGCTGGTTGAGTATGAAGGCAGTGCTGAAGGGCTCGTCCAGTCCTTCGTCGAACGCTTCCCTGATGATGGCGAGGAGGTAGAGGCCCAGCTTCTGGAAATGACCCTCACGGATTCCACCTGCTGGTGCTGAGAGGACACAGTGCCGTGGAAGACATCGTCTCAGACGAGTATTAGACCACACTGAGTCACAGCAACTTTCGGAACGGAACAAAAGGCTCCAAAGAGCACAAGGAAGGGACTGGTAATGATTATAAAACCATTCACATGTTGGAGGAAGGAAGAACCACACTTAAACACAGGAACATAACAACAAGTGCTTTACCTTCCCATTGTTTTTTCTTTCTATTTTGTCTGTTCATTTCTAAACAAAGGCAACGTTGATTAGAGTTTTAAATAGAAATTTCTGTTCCAGTTTCGAATCCGACCGCAGCCCACGCTTCCCACATAGGCATGTGAAAGTGCTGACAAGAGTGAACTTGCTGTGTGAGGGTGGGACTTATGTAATCACAACACGTAACACACATTCTCAAATTACTTTAAAATGGAAACAACTTCAGATCATATTTAGTGTTCTAGAGTTCATATGCTGATTCACTGATATCTAGGAGAAATGGTAGCATTCATTCTTAAGAATGTAAATTTCATTGATTTACAAGATTTTCAGTTCCTCAAAGTGTTCAGTGTGGACTGTGAAAACCAACAGTTCCTACCAAATAAA

Function

symbol description
dpp3 Predicted to enable dipeptidyl-peptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in cytoplasm. Is expressed in lens and solid lens vesicle. Orthologous to human DPP3 (dipeptidyl peptidase 3).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01277 DPP3; dipeptidyl-peptidase III

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_03335446_03344286.mRNA True 2805 mRNA 0.49 17 3334858 3344286

Neighbor

gene id symbol gene type direction distance location
CI01000006_03319976_03322908 RBM14A coding downstream 9819 3319887 ~ 3325039 (-)
CI01000006_03300379_03312388 ACTN3, ACTN3A, ACTN3B, ACTN3.L coding downstream 22470 3300046 ~ 3312388 (-)
CI01000006_03270739_03288631 NA coding downstream 45344 3270365 ~ 3289514 (-)
CI01000006_03256291_03262601 NA coding downstream 72257 3256143 ~ 3262601 (-)
CI01000006_03244690_03253311 BBS1 coding downstream 81547 3244573 ~ 3253311 (-)
CI01000006_03357824_03365324 SART1 coding upstream 13512 3357798 ~ 3365324 (-)
CI01000006_03366101_03366985 NA coding upstream 21777 3366063 ~ 3366985 (-)
CI01000006_03370040_03371517 NA coding upstream 24606 3368892 ~ 3371676 (-)
CI01000006_03379749_03383412 NA coding upstream 35439 3379725 ~ 3383879 (-)
CI01000006_03451569_03452222 BADA coding upstream 107100 3451386 ~ 3453466 (-)
G43282 NA non-coding downstream 136636 3197876 ~ 3198222 (-)
G43274 NA non-coding downstream 172558 3162070 ~ 3162300 (-)
G43148 NA non-coding downstream 173091 3140950 ~ 3161767 (-)
G43264 NA non-coding downstream 216765 3117424 ~ 3118093 (-)
G43262 NA non-coding downstream 218672 3112511 ~ 3116186 (-)
G43301 NA non-coding upstream 59153 3403439 ~ 3407475 (-)
G43334 NA non-coding upstream 184607 3528893 ~ 3529172 (-)
G43335 NA non-coding upstream 185043 3529329 ~ 3531439 (-)
G43336 NA non-coding upstream 189242 3533528 ~ 3534121 (-)
G43337 NA non-coding upstream 190685 3534971 ~ 3535333 (-)
G43102 NA other downstream 400874 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 708672 2624436 ~ 2626776 (-)
G42934 NA other downstream 752652 2523776 ~ 2582206 (-)
CI01000006_02285649_02294759 NA other downstream 1039860 2284994 ~ 2296494 (-)
G42667 NA other downstream 1444102 1888988 ~ 1890756 (-)
G43549 NA other upstream 1008224 4352510 ~ 4355428 (-)
CI01000006_04560607_04560993 NA other upstream 1215223 4559509 ~ 4562068 (-)
CI01000006_06974359_06976736 NA other upstream 3628938 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 4158859 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 7138570 10453613 ~ 10484006 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00015442 NA coding CM030132.1 CM030132.1 9559279 ~ 9566100 (-)