CI01000006_06111210_06113067


Basic Information

Item Value
gene id CI01000006_06111210_06113067
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6111107 ~ 6113123 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06111210_06113067.mRNA
ATATATAAAACAGGTATAATCTTTAAATCAGCTTCATTCATTTAAAACAACAACAATGTAGAACATTTTTAGTTATATTTTCAGTCTCAATAGTAACTCAAAGATGACAACTCTTGAGAAGACAATCAGCAAGCAGCAGAGACCATCTCTAAGAATCCCATTTGGTCATCGGCGTAGAACAGATTTATTGCTCCTCAAAAATGGTCAAATGGTGTCGAAACACCCACAAGCCTTTCCGATGCTGGGAGAACTTCCTTCTTTGGCAGGCTTGCTGCTCTATCCTGGTAAGCGGGAAAAGATGGTAACCACAACAGAAAGTGAATTTGGACCCAAAAAATGCCCAAAGGTAGAGCCAAAGAAGATCCTACAGTGCAACCTAACTCTAGATGGGGACAGGAGCTTCAGCACAACAAACAGGGAGGATTACCCTTCTTACAACCTAGATGGCGCTCCAATTGCATGGCAGGGAAAAGTACCAGCAAGAGACAACAGGACTGGCCAAGCACAGAGATGTTCTCTTTACCAGCAGGACTTCCCAGCCCCAAAGAGAATCTATATTAGGAGAAATCAGGTCGTACCTCATCCCGACAACCTGGCGATCAACACTTCAATGAGGCAAGTGTACAACCCATGAACTTATATTCTGTTTTACCTGAAATCTGAACTGAAAATATTGTGAAAGCAATCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06111210_06113067.mRNA True 690 mRNA 0.42 3 6111107 6113123

Neighbor

gene id symbol gene type direction distance location
CI01000006_06104927_06109730 NA coding upstream 1287 6104927 ~ 6109820 (+)
CI01000006_06100199_06103495 FBXO40.1 coding upstream 7584 6100199 ~ 6103523 (+)
CI01000006_06095035_06097240 FBXO40.2 coding upstream 13867 6095035 ~ 6097240 (+)
CI01000006_06049283_06057849 TRPC6, TRPC6A, TRPC6B coding upstream 52231 6049283 ~ 6058876 (+)
CI01000006_06038315_06045317 ANGPTL5 coding upstream 65423 6038315 ~ 6045684 (+)
CI01000006_06122278_06122736 NA coding downstream 8956 6122035 ~ 6122751 (+)
CI01000006_06136379_06136891 NA coding downstream 22693 6135816 ~ 6137257 (+)
CI01000006_06142449_06142925 GIG2I coding downstream 29176 6142299 ~ 6143068 (+)
CI01000006_06146799_06148260 NA coding downstream 33606 6146729 ~ 6148405 (+)
CI01000006_06171151_06179449 PVRL1A coding downstream 58028 6171151 ~ 6181375 (+)
G43988 NA non-coding upstream 701 6110166 ~ 6110406 (+)
G43970 NA non-coding upstream 38401 6072397 ~ 6072706 (+)
G43887 NA non-coding upstream 306946 5792917 ~ 5804161 (+)
G43898 NA non-coding upstream 320193 5789421 ~ 5790914 (+)
G43903 NA non-coding upstream 337158 5771881 ~ 5773949 (+)
G43990 NA non-coding downstream 7235 6120358 ~ 6120735 (+)
G43908 NA non-coding downstream 38750 6151873 ~ 6154727 (+)
G43904 NA non-coding downstream 81046 6194169 ~ 6199969 (+)
G44009 NA non-coding downstream 159815 6272938 ~ 6273227 (+)
G44010 NA non-coding downstream 161882 6275005 ~ 6275234 (+)
G43896 NA other upstream 339332 5770089 ~ 5771775 (+)
G41996 NA other upstream 986958 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2375129 3734554 ~ 3736035 (+)
G41591 NA other upstream 3271686 2836167 ~ 2839421 (+)
CI01000006_07167131_07168925 NA other downstream 1053666 7166778 ~ 7168925 (+)
G44872 NA other downstream 1243229 7356352 ~ 7387884 (+)
G45178 NA other downstream 1508868 7607604 ~ 7683671 (+)
G45265 NA other downstream 1770744 7883867 ~ 7920355 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location