G43988


Basic Information

Item Value
gene id G43988
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6110166 ~ 6110406 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU49934
ATGAAAATTCAGCTTTGACATCAGGAATATTTTTTATTAAATTTTAAAATATATTCAATAGTTCTTTTAAATTGTAGTAATCTTCCATATTATTACTGTTTTTACTGCATTTTGATATAAATGCAAAATTGGTGAACATAAGAGACTTCATTCATAACCATTAAAACATTTTTCTCTCTTTGCATTTTCTATAACAATACATAAAAATATTTATATGTGTATGAATTTAACTATTCCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49934 True 241 lncRNA 0.22 1 6110166 6110406

Neighbor

gene id symbol gene type direction distance location
CI01000006_06104927_06109730 NA coding upstream 346 6104927 ~ 6109820 (+)
CI01000006_06100199_06103495 FBXO40.1 coding upstream 6643 6100199 ~ 6103523 (+)
CI01000006_06095035_06097240 FBXO40.2 coding upstream 12926 6095035 ~ 6097240 (+)
CI01000006_06049283_06057849 TRPC6, TRPC6A, TRPC6B coding upstream 51290 6049283 ~ 6058876 (+)
CI01000006_06038315_06045317 ANGPTL5 coding upstream 64482 6038315 ~ 6045684 (+)
CI01000006_06111210_06113067 NA coding downstream 701 6111107 ~ 6113123 (+)
CI01000006_06122278_06122736 NA coding downstream 11673 6122035 ~ 6122751 (+)
CI01000006_06136379_06136891 NA coding downstream 25410 6135816 ~ 6137257 (+)
CI01000006_06142449_06142925 GIG2I coding downstream 31893 6142299 ~ 6143068 (+)
CI01000006_06146799_06148260 NA coding downstream 36323 6146729 ~ 6148405 (+)
G43970 NA non-coding upstream 37460 6072397 ~ 6072706 (+)
G43887 NA non-coding upstream 306005 5792917 ~ 5804161 (+)
G43898 NA non-coding upstream 319252 5789421 ~ 5790914 (+)
G43903 NA non-coding upstream 336217 5771881 ~ 5773949 (+)
G43942 NA non-coding upstream 667243 5442465 ~ 5442923 (+)
G43990 NA non-coding downstream 9952 6120358 ~ 6120735 (+)
G43908 NA non-coding downstream 41467 6151873 ~ 6154727 (+)
G43904 NA non-coding downstream 83763 6194169 ~ 6199969 (+)
G44009 NA non-coding downstream 162532 6272938 ~ 6273227 (+)
G44010 NA non-coding downstream 164599 6275005 ~ 6275234 (+)
G43896 NA other upstream 338391 5770089 ~ 5771775 (+)
G41996 NA other upstream 986017 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2374188 3734554 ~ 3736035 (+)
G41591 NA other upstream 3270745 2836167 ~ 2839421 (+)
CI01000006_07167131_07168925 NA other downstream 1056383 7166778 ~ 7168925 (+)
G44872 NA other downstream 1245946 7356352 ~ 7387884 (+)
G45178 NA other downstream 1511585 7607604 ~ 7683671 (+)
G45265 NA other downstream 1773461 7883867 ~ 7920355 (+)

Expression


Co-expression Network