Gene
RNA
| Item | Value |
|---|---|
| gene id | G42868 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 2371320 ~ 2371529 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48680 | True | 210 | lncRNA | 0.35 | 1 | 2371320 | 2371529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_02297635_02343401 | PPP3CA, PPP3CB | coding | downstream | 27919 | 2297082 ~ 2343401 (-) |
| CI01000006_02285649_02294759 | NA | coding | downstream | 74826 | 2284994 ~ 2296494 (-) |
| CI01000006_02262424_02271592 | DNAJC18 | coding | downstream | 99728 | 2261937 ~ 2271592 (-) |
| CI01000006_02233131_02238377 | HNRNPH1, HNRH1, HNRNPH1L | coding | downstream | 132807 | 2232914 ~ 2238513 (-) |
| CI01000006_02230950_02231194 | NA | coding | downstream | 140126 | 2230452 ~ 2231194 (-) |
| CI01000006_02448953_02467739 | NA | coding | upstream | 76421 | 2447950 ~ 2467739 (-) |
| CI01000006_02481958_02482821 | PURA, PURAB, PURAA, PURA.L | coding | upstream | 109866 | 2481395 ~ 2483128 (-) |
| CI01000006_02516145_02524371 | NA | coding | upstream | 144600 | 2516129 ~ 2525809 (-) |
| CI01000006_02617160_02621622 | OTUB1, OTUB1A, OTUB1B | coding | upstream | 245601 | 2617130 ~ 2621622 (-) |
| CI01000006_02624725_02626124 | COX8A | coding | upstream | 252926 | 2624436 ~ 2626776 (-) |
| G42818 | NA | non-coding | downstream | 209571 | 2161267 ~ 2161749 (-) |
| G42808 | NA | non-coding | downstream | 211120 | 2158092 ~ 2160200 (-) |
| G42759 | NA | non-coding | downstream | 275473 | 2040099 ~ 2095847 (-) |
| G42744 | NA | non-coding | downstream | 394090 | 1976687 ~ 1977230 (-) |
| G42890 | NA | non-coding | upstream | 44212 | 2415741 ~ 2415961 (-) |
| G42905 | NA | non-coding | upstream | 60504 | 2432033 ~ 2432583 (-) |
| G42910 | NA | non-coding | upstream | 113567 | 2485096 ~ 2485317 (-) |
| G42912 | NA | non-coding | upstream | 114370 | 2485899 ~ 2486114 (-) |
| G42913 | NA | non-coding | upstream | 114696 | 2486225 ~ 2486746 (-) |
| G42667 | NA | other | downstream | 480564 | 1888988 ~ 1890756 (-) |
| G42692 | NA | other | downstream | 582686 | 1785501 ~ 1788634 (-) |
| G42285 | NA | other | downstream | 2015181 | 355813 ~ 356139 (-) |
| G42934 | NA | other | upstream | 197384 | 2523776 ~ 2582206 (-) |
| G43102 | NA | other | upstream | 536922 | 2908451 ~ 2933984 (-) |
| G43549 | NA | other | upstream | 1980981 | 4352510 ~ 4355428 (-) |
| CI01000006_04560607_04560993 | NA | other | upstream | 2187980 | 4559509 ~ 4562068 (-) |
