Gene
RNA
| Item | Value |
|---|---|
| gene id | G42818 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 2161267 ~ 2161749 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48617 | True | 483 | lncRNA | 0.35 | 1 | 2161267 | 2161749 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_02148291_02155645 | PWWP2A | coding | downstream | 4900 | 2146863 ~ 2156367 (-) |
| CI01000006_02144479_02144813 | NA | coding | downstream | 16454 | 2144435 ~ 2144813 (-) |
| CI01000006_02061413_02070784 | NA | coding | downstream | 89862 | 2061242 ~ 2071405 (-) |
| CI01000006_02054408_02058623 | NA | coding | downstream | 102494 | 2054408 ~ 2058773 (-) |
| CI01000006_02018771_02022870 | ZMAT2, ZMAT2.L | coding | downstream | 138397 | 2018282 ~ 2022870 (-) |
| CI01000006_02164837_02173343 | CCNJ, CCNJL | coding | upstream | 2293 | 2164042 ~ 2173343 (-) |
| CI01000006_02186968_02197039 | SLC23A1 | coding | upstream | 25160 | 2186909 ~ 2197039 (-) |
| CI01000006_02224923_02225933 | PFDN1, PFD1 | coding | upstream | 63174 | 2224923 ~ 2226124 (-) |
| CI01000006_02227697_02229505 | NA | coding | upstream | 65184 | 2226933 ~ 2230287 (-) |
| CI01000006_02230950_02231194 | NA | coding | upstream | 68703 | 2230452 ~ 2231194 (-) |
| G42808 | NA | non-coding | downstream | 1067 | 2158092 ~ 2160200 (-) |
| G42759 | NA | non-coding | downstream | 65420 | 2040099 ~ 2095847 (-) |
| G42744 | NA | non-coding | downstream | 184037 | 1976687 ~ 1977230 (-) |
| G42739 | NA | non-coding | downstream | 191488 | 1969554 ~ 1969779 (-) |
| G42721 | NA | non-coding | downstream | 244771 | 1916288 ~ 1916496 (-) |
| CI01000006_02297635_02343401 | PPP3CA, PPP3CB | non-coding | upstream | 180802 | 2297082 ~ 2343401 (-) |
| G42868 | NA | non-coding | upstream | 209571 | 2371320 ~ 2371529 (-) |
| G42890 | NA | non-coding | upstream | 253992 | 2415741 ~ 2415961 (-) |
| G42905 | NA | non-coding | upstream | 270284 | 2432033 ~ 2432583 (-) |
| G42910 | NA | non-coding | upstream | 323347 | 2485096 ~ 2485317 (-) |
| G42667 | NA | other | downstream | 270511 | 1888988 ~ 1890756 (-) |
| G42692 | NA | other | downstream | 372633 | 1785501 ~ 1788634 (-) |
| G42285 | NA | other | downstream | 1805128 | 355813 ~ 356139 (-) |
| CI01000006_02285649_02294759 | NA | other | upstream | 123083 | 2284994 ~ 2296494 (-) |
| G42934 | NA | other | upstream | 407164 | 2523776 ~ 2582206 (-) |
| CI01000006_02624725_02626124 | COX8A | other | upstream | 408025 | 2624436 ~ 2626776 (-) |
| G43102 | NA | other | upstream | 746702 | 2908451 ~ 2933984 (-) |
| G43549 | NA | other | upstream | 2190761 | 4352510 ~ 4355428 (-) |
