Gene
RNA
| Item | Value |
|---|---|
| gene id | G42739 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 1969554 ~ 1969779 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48513 | True | 226 | lncRNA | 0.40 | 1 | 1969554 | 1969779 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_01923864_01927117 | SNX12.L, SNX12 | coding | downstream | 41897 | 1923713 ~ 1927657 (-) |
| CI01000006_01897638_01904724 | SLC7A3A | coding | downstream | 64784 | 1897516 ~ 1904770 (-) |
| CI01000006_01884281_01887304 | RAB38C | coding | downstream | 81180 | 1883831 ~ 1888374 (-) |
| CI01000006_01864365_01882955 | NA | coding | downstream | 86599 | 1864365 ~ 1882955 (-) |
| CI01000006_01825754_01835213 | CLCN5, CLCN5A | coding | downstream | 134341 | 1824926 ~ 1835213 (-) |
| CI01000006_01990505_01991683 | FOXI3A | coding | upstream | 20278 | 1990057 ~ 1991779 (-) |
| CI01000006_02000378_02005713 | NA | coding | upstream | 30599 | 2000378 ~ 2006213 (-) |
| CI01000006_02018771_02022870 | ZMAT2, ZMAT2.L | coding | upstream | 48503 | 2018282 ~ 2022870 (-) |
| CI01000006_02054408_02058623 | NA | coding | upstream | 84629 | 2054408 ~ 2058773 (-) |
| CI01000006_02061413_02070784 | NA | coding | upstream | 91463 | 2061242 ~ 2071405 (-) |
| G42721 | NA | non-coding | downstream | 53058 | 1916288 ~ 1916496 (-) |
| G42714 | NA | non-coding | downstream | 128745 | 1840476 ~ 1840809 (-) |
| G42692 | NA | non-coding | downstream | 180920 | 1785501 ~ 1788634 (-) |
| G42693 | NA | non-coding | downstream | 185488 | 1783205 ~ 1784066 (-) |
| G42694 | NA | non-coding | downstream | 192416 | 1776685 ~ 1777138 (-) |
| G42744 | NA | non-coding | upstream | 6908 | 1976687 ~ 1977230 (-) |
| G42759 | NA | non-coding | upstream | 70320 | 2040099 ~ 2095847 (-) |
| G42808 | NA | non-coding | upstream | 188313 | 2158092 ~ 2160200 (-) |
| G42818 | NA | non-coding | upstream | 191488 | 2161267 ~ 2161749 (-) |
| CI01000006_02297635_02343401 | PPP3CA, PPP3CB | non-coding | upstream | 372772 | 2297082 ~ 2343401 (-) |
| G42667 | NA | other | downstream | 78798 | 1888988 ~ 1890756 (-) |
| G42285 | NA | other | downstream | 1613415 | 355813 ~ 356139 (-) |
| CI01000006_02285649_02294759 | NA | other | upstream | 315053 | 2284994 ~ 2296494 (-) |
| G42934 | NA | other | upstream | 599134 | 2523776 ~ 2582206 (-) |
| CI01000006_02624725_02626124 | COX8A | other | upstream | 599995 | 2624436 ~ 2626776 (-) |
| G43102 | NA | other | upstream | 938672 | 2908451 ~ 2933984 (-) |
| G43549 | NA | other | upstream | 2382731 | 4352510 ~ 4355428 (-) |
