Gene
RNA
| Item | Value |
|---|---|
| gene id | G42714 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 1840476 ~ 1840809 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48485 | True | 334 | lncRNA | 0.31 | 1 | 1840476 | 1840809 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_01825754_01835213 | CLCN5, CLCN5A | coding | downstream | 5263 | 1824926 ~ 1835213 (-) |
| CI01000006_01806389_01811758 | NA | coding | downstream | 28718 | 1805452 ~ 1811758 (-) |
| CI01000006_01790786_01803089 | TRPC2A, TRPC2B | coding | downstream | 37387 | 1789199 ~ 1803089 (-) |
| CI01000006_01741474_01759775 | NA | coding | downstream | 79373 | 1741014 ~ 1761103 (-) |
| CI01000006_01695152_01695781 | RHOGB, RHOG, RHOG.S | coding | downstream | 144695 | 1695145 ~ 1695781 (-) |
| CI01000006_01864365_01882955 | NA | coding | upstream | 23556 | 1864365 ~ 1882955 (-) |
| CI01000006_01884281_01887304 | RAB38C | coding | upstream | 43022 | 1883831 ~ 1888374 (-) |
| CI01000006_01897638_01904724 | SLC7A3A | coding | upstream | 56707 | 1897516 ~ 1904770 (-) |
| CI01000006_01923864_01927117 | SNX12.L, SNX12 | coding | upstream | 82904 | 1923713 ~ 1927657 (-) |
| CI01000006_01990505_01991683 | FOXI3A | coding | upstream | 149248 | 1990057 ~ 1991779 (-) |
| G42692 | NA | non-coding | downstream | 51842 | 1785501 ~ 1788634 (-) |
| G42693 | NA | non-coding | downstream | 56410 | 1783205 ~ 1784066 (-) |
| G42694 | NA | non-coding | downstream | 63338 | 1776685 ~ 1777138 (-) |
| G42691 | NA | non-coding | downstream | 78969 | 1761167 ~ 1761507 (-) |
| G42658 | NA | non-coding | downstream | 109149 | 1702230 ~ 1731327 (-) |
| G42721 | NA | non-coding | upstream | 75479 | 1916288 ~ 1916496 (-) |
| G42739 | NA | non-coding | upstream | 128745 | 1969554 ~ 1969779 (-) |
| G42744 | NA | non-coding | upstream | 135878 | 1976687 ~ 1977230 (-) |
| G42759 | NA | non-coding | upstream | 199290 | 2040099 ~ 2095847 (-) |
| G42808 | NA | non-coding | upstream | 317283 | 2158092 ~ 2160200 (-) |
| G42285 | NA | other | downstream | 1484337 | 355813 ~ 356139 (-) |
| G42667 | NA | other | upstream | 48179 | 1888988 ~ 1890756 (-) |
| CI01000006_02285649_02294759 | NA | other | upstream | 444023 | 2284994 ~ 2296494 (-) |
| G42934 | NA | other | upstream | 728104 | 2523776 ~ 2582206 (-) |
| CI01000006_02624725_02626124 | COX8A | other | upstream | 728965 | 2624436 ~ 2626776 (-) |
| G43102 | NA | other | upstream | 1067642 | 2908451 ~ 2933984 (-) |
