zbtb14 (zbtb14,LOC107698704)


Basic Information

Item Value
gene id zbtb14
gene name zbtb14,LOC107698704
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 28159733 ~ 28163252 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007236002.3
CTGGCGGTTGCGCACGTTCTCGTGCTCTGCGGCTTCGTGCTGGCGCAGCGCGTCCTCCTTCCGTGTGTGCTCGTCCTCGAcgctcacaaaaaaaacacacacagaaagtgtATTTTTCTCTGCTGGTGCTGTGACACCCCGCCCCGGACTTCTCCAGAGGGTCTAAACGGCGCGCAAAGACGGAGCCCGTCCCAGCATGTCAGAGACTGTGAAGTATGTGGATGATGATCACAaaaccatatttttaaaaatattaaacgaGCAGAGGCTGGAGGGTGAACACTGCGACATTGCAGTAGTTGTGGAAGATGTCAAGTTCAGGGCACATCGATGTGTGTTAGCCGCTTGCAGCAACTACTTCAAAAAGCTTTTTAAGAAACACGAGGTGGACAGCTCCTCTGTCATCGAGATCGACTTCATCCGCTCGGACATCTTCGAAGAGGTACTGAACTATATGTACACAGCTAAAATTTCAGTTAAGAAAAAAGATGTTAATTTGATGATGTCATCTGGACAGATCCTTGGAATCCGGTTTTTGGATAAGCTGTGCTCTCAGAAAAGGGACATGTCTACCGAGGAGAAAAACGAACTTCGGAATTCCAGGTCACCTTATGACATTGTGAAAATTGGCCTTCAAACTGATGAGGCTCAGTTAAGCCAGGACAATGATGTGCACGTGCTTGGAGACCAAGATGACACACCTTCTGATGACATTGTTGAGGAAGCTCAAGGCAATCATGATCTGGAAAAATCTCCCAACAGTGCCCTTCGAGTAGAGGAGGCTCTTCTGAAAGAACTGGCCCAGGAGGGAGTAAATAAAGTTGCTTGCTATGACCAAGAGGTGGAACCAATTGACCCTGAGCCCAAAGAACTTGCAGCTCACACCCAAACTCTCTCATTTGCTGATAGCATGGGGGAGGTTAAGGATGAGCAAGCCCCTGGATGGACTGCAGCTGCCGCTGAAATGAAGCTGGAATATCTACTGTATGGACACCGGGACCACTTTGCTTGCCAGATTTGTGGCAAGACCTTCCTCGATGAGAGTAGGCTGAGGAAGCATGAAAAGCTGCATTCTGCTGAGAGACCGTTTATATGTGAGATATGCCCCAAAGCATTCACCACGCAGGCCCACTTGAAAGAGCATCTGAAAATTCACACAGGCTTCAAGCCCTACCGATGCGATGACTGCGGCAAGTCTTTCATCCGAGCCCCTGATCTGAAGAAACATGAGAGGGTGCACAGCAACGAGCGTCCCTTTGGCTGTCAAATGTGCGAAAAAGCCTTTAAGCATAAGTCCCACCTGAAAGACCATGAACGCAGACACAGGGGCGAAAAGCCCTTCATGTGTGGTGCCTGTCCCAAGGCTTTTGCCAAAGCTTCTGATCTAAAGAGACATGAGAACAACATGCATAGTGAGAGGAAGCAGCTGTGTGGCAACAGCTTACAGAGTGAGACTGAGCAGCTGCAAGCAGCAGCTATGGCTGCAGAGGCTGAACAACAACTGGAATCCATAGCATGCTCGTAA
>XM_007236004.3
GGTTGCGCACGTTCTCGTGCTCTGCGGCTTCGTGCTGGCGCAGCGCGTCCTCCTTCCGTGTGTGCTCGTCCTCGAcgctcacaaaaaaaacacacacagaaagtgtATTTTTCTCTGCTGGTGCTGTGACACCCCGCCCCGGACTTCTCCAGAGGGTCTAAACGGCGCGCAAAGACGGAGCCCGTCCCAGCATGTCAGAGACTGTGAAGTATGTGGATGATGATCACAaaaccatatttttaaaaatattaaacgaGCAGAGGCTGGAGGGTGAACACTGCGACATTGCAGTAGTTGTGGAAGATGTCAAGTTCAGGGCACATCGATGTGTGTTAGCCGCTTGCAGCAACTACTTCAAAAAGCTTTTTAAGAAACACGAGGTGGACAGCTCCTCTGTCATCGAGATCGACTTCATCCGCTCGGACATCTTCGAAGAGATCCTTGGAATCCGGTTTTTGGATAAGCTGTGCTCTCAGAAAAGGGACATGTCTACCGAGGAGAAAAACGAACTTCGGAATTCCAGGTCACCTTATGACATTGTGAAAATTGGCCTTCAAACTGATGAGGCTCAGTTAAGCCAGGACAATGATGTGCACGTGCTTGGAGACCAAGATGACACACCTTCTGATGACATTGTTGAGGAAGCTCAAGGCAATCATGATCTGGAAAAATCTCCCAACAGTGCCCTTCGAGTAGAGGAGGCTCTTCTGAAAGAACTGGCCCAGGAGGGAGTAAATAAAGTTGCTTGCTATGACCAAGAGGTGGAACCAATTGACCCTGAGCCCAAAGAACTTGCAGCTCACACCCAAACTCTCTCATTTGCTGATAGCATGGGGGAGGTTAAGGATGAGCAAGCCCCTGGATGGACTGCAGCTGCCGCTGAAATGAAGCTGGAATATCTACTGTATGGACACCGGGACCACTTTGCTTGCCAGATTTGTGGCAAGACCTTCCTCGATGAGAGTAGGCTGAGGAAGCATGAAAAGCTGCATTCTGCTGAGAGACCGTTTATATGTGAGATATGCCCCAAAGCATTCACCACGCAGGCCCACTTGAAAGAGCATCTGAAAATTCACACAGGCTTCAAGCCCTACCGATGCGATGACTGCGGCAAGTCTTTCATCCGAGCCCCTGATCTGAAGAAACATGAGAGGGTGCACAGCAACGAGCGTCCCTTTGGCTGTCAAATGTGCGAAAAAGCCTTTAAGCATAAGTCCCACCTGAAAGACCATGAACGCAGACACAGGGGCGAAAAGCCCTTCATGTGTGGTGCCTGTCCCAAGGCTTTTGCCAAAGCTTCTGATCTAAAGAGACATGAGAACAACATGCATAGTGAGAGGAAGCAGCTGTGTGGCAACAGCTTACAGAGTGAGACTGAGCAGCTGCAAGCAGCAGCTATGGCTGCAGAGGCTGAACAACAACTGGAATCCATAGCATGCTCGTAACATACTGTTTGTCTGACACAAACCCATGCACTGTAAAACAATCTTTTCATACTTATTTTGTTTTGTCCAGCAGATGTAGTCTTATTGTTTAACTGGTCTTGGTATAAGTTCTTTTTTGAACTGTTGGAATTTTAGATCTCTGTAGTCAGAAAATTGATTTTCTTAAATATAGACCAATGGGTTGATTTACACTGTTgaatgattgtttttttattttttatttctttctcagaTGTAAATGGTGCAAGAATTTTGTTTCTCACTGTACAGTTCATACCAAATGTATTTGAATAGTTGCGGCAGTCTGATGGACAAATAGACAAAGAATTGCACTGCCTTACACTTCTTGACATGGTAAAGATGTTCTGCAGCACCTGTTTGGCTATGAAGATGggaaagcaggaaaaaaaaactgaacaaatacatttttggtgGTCAGCCATTCCATCAATTATGTTGCAAGATGAAATGAAGATTTAGCATAATATTTTTGCTGTAATAAAATGAATTTCCTATGAGGAC
>XM_022673902.1
GACGGGGCTGGGCGTGCTCGTCCTCAGTCGGGAACGGCGCCGTCCTCGTCGTGTGCTCCTCCATTTTTTAACGCCGAGAGCAGCGGGGGAACGGGAGCGACCCGCTGCTACGGAGAGCGACAACTCCGCCATGCATTTAAGACGGAGCCCGTCCCAGCATGTCAGAGACTGTGAAGTATGTGGATGATGATCACAaaaccatatttttaaaaatattaaacgaGCAGAGGCTGGAGGGTGAACACTGCGACATTGCAGTAGTTGTGGAAGATGTCAAGTTCAGGGCACATCGATGTGTGTTAGCCGCTTGCAGCAACTACTTCAAAAAGCTTTTTAAGAAACACGAGGTGGACAGCTCCTCTGTCATCGAGATCGACTTCATCCGCTCGGACATCTTCGAAGAGGTACTGAACTATATGTACACAGCTAAAATTTCAGTTAAGAAAAAAGATGTTAATTTGATGATGTCATCTGGACAGATCCTTGGAATCCGGTTTTTGGATAAGCTGTGCTCTCAGAAAAGGGACATGTCTACCGAGGAGAAAAACGAACTTCGGAATTCCAGGTCACCTTATGACATTGTGAAAATTGGCCTTCAAACTGATGAGGCTCAGTTAAGCCAGGACAATGATGTGCACGTGCTTGGAGACCAAGATGACACACCTTCTGATGACATTGTTGAGGAAGCTCAAGGCAATCATGATCTGGAAAAATCTCCCAACAGTGCCCTTCGAGTAGAGGAGGCTCTTCTGAAAGAACTGGCCCAGGAGGGAGTAAATAAAGTTGCTTGCTATGACCAAGAGGTGGAACCAATTGACCCTGAGCCCAAAGAACTTGCAGCTCACACCCAAACTCTCTCATTTGCTGATAGCATGGGGGAGGTTAAGGATGAGCAAGCCCCTGGATGGACTGCAGCTGCCGCTGAAATGAAGCTGGAATATCTACTGTATGGACACCGGGACCACTTTGCTTGCCAGATTTGTGGCAAGACCTTCCTCGATGAGAGTAGGCTGAGGAAGCATGAAAAGCTGCATTCTGCTGAGAGACCGTTTATATGTGAGATATGCCCCAAAGCATTCACCACGCAGGCCCACTTGAAAGAGCATCTGAAAATTCACACAGGCTTCAAGCCCTACCGATGCGATGACTGCGGCAAGTCTTTCATCCGAGCCCCTGATCTGAAGAAACATGAGAGGGTGCACAGCAACGAGCGTCCCTTTGGCTGTCAAATGTGCGAAAAAGCCTTTAAGCATAAGTCCCACCTGAAAGACCATGAACGCAGACACAGGGGCGAAAAGCCCTTCATGTGTGGTGCCTGTCCCAAGGCTTTTGCCAAAGCTTCTGATCTAAAGAGACATGAGAACAACATGCATAGTGAGAGGAAGCAGCTGTGTGGCAACAGCTTACAGAGTGAGACTGAGCAGCTGCAAGCAGCAGCTATGGCTGCAGAGGCTGAACAACAACTGGAATCCATAGCATGCTCGTAA

Function

symbol description
zbtb14 Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Orthologous to human ZBTB14 (zinc finger and BTB domain containing 14).

NR:

description
zinc finger and BTB domain-containing protein 14-like isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007236002.3 False 1525 mRNA 0.49 2 28159733 28162730
XM_007236004.3 True 1967 mRNA 0.45 3 28159738 28163252
XM_022673902.1 False 1487 mRNA 0.49 2 28160044 28162730

Neighbor

gene id symbol gene type direction distance location
LOC103040375 LOC108432756 coding upstream 3141 28005198 ~ 28156592 (+)
tmem200c tmem200c coding upstream 175951 27957878 ~ 27983782 (+)
capn7 capn7,LOC107705521,LOC107755679 coding upstream 910949 27225087 ~ 27248784 (+)
nub1 NA coding upstream 942846 27207410 ~ 27216887 (+)
LOC103039637 NA coding upstream 954395 27197914 ~ 27205338 (+)
LOC103043264 LOC107698705,LOC107728997,LOC108276921,LOC108432759 coding downstream 564 28163816 ~ 28182133 (+)
LOC103040072 LOC108432760 coding downstream 49572 28212824 ~ 28226157 (+)
ppp4r1 ppp4r1,LOC106579644 coding downstream 78965 28242217 ~ 28268713 (+)
LOC103037774 NA coding downstream 135076 28298328 ~ 28301141 (+)
LOC103037440 NA coding downstream 141282 28304534 ~ 28308650 (+)
G93961 NA non-coding upstream 695 28158779 ~ 28159038 (+)
G93959 NA non-coding upstream 12240 28145826 ~ 28147493 (+)
G93882 NA non-coding upstream 650197 27508985 ~ 27509536 (+)
G93864 NA non-coding upstream 682543 27476918 ~ 27477190 (+)
G93856 NA non-coding upstream 722761 27436756 ~ 27436972 (+)
G93973 NA non-coding downstream 107895 28271147 ~ 28273486 (+)
G93979 ssr1 non-coding downstream 122304 28285556 ~ 28317908 (+)
G93981 NA non-coding downstream 123924 28287176 ~ 28288253 (+)
G93975 NA non-coding downstream 130720 28293972 ~ 28296031 (+)
G94002 LOC108432767,LOC108271151,LOC107705358,LOC107588508,LOC104959250 non-coding downstream 202355 28365607 ~ 28370263 (+)
LOC111193309 l3mbtl4,LOC108432753,LOC107698702,LOC107570871,LOC107728988,LOC107653885,LOC106590345 other upstream 219800 27919092 ~ 27939933 (+)
G93753 NA other upstream 1210854 26948463 ~ 26948879 (+)
LOC103034726 LOC108436089 other upstream 1767298 26267493 ~ 26392435 (+)
G93185 LOC105900568,LOC101883708 other upstream 2846026 25311877 ~ 25313707 (+)
G93135 NA other upstream 3194289 24914689 ~ 24965444 (+)
LOC103021747 rheb,LOC107653878,LOC106590380 other downstream 1046026 29209278 ~ 29326025 (+)
LOC103044382 NA other downstream 1087781 29251033 ~ 29346842 (+)
LOC111193374 NA other downstream 1092926 29256178 ~ 29256564 (+)
G94233 NA other downstream 1107051 29270303 ~ 29365656 (+)
G94241 NA other downstream 1219303 29382555 ~ 29383298 (+)

Expression


Co-expression Network