G93961


Basic Information

Item Value
gene id G93961
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 28158779 ~ 28159038 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU126374
agctctggactctgtggtaaacaatccatgtgtgaaaatgatgatctcatgctccctgaaccactctttcacaattccagccccatgaatcctggcattgtaatcttggaatatacccgtgccatcagggaggaaaaatccattgatggaataacctggtatATATTCAGGttgtcagctgacctcattctttcagcacatactgtagcTGAACcaagacctgaccaactgcagcaacagaGTCTATAGTTGCAAAGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126374 True 260 lncRNA 0.43 1 28158779 28159038

Neighbor

gene id symbol gene type direction distance location
LOC103040375 LOC108432756 coding upstream 2187 28005198 ~ 28156592 (+)
tmem200c tmem200c coding upstream 174997 27957878 ~ 27983782 (+)
capn7 capn7,LOC107705521,LOC107755679 coding upstream 909995 27225087 ~ 27248784 (+)
nub1 NA coding upstream 941892 27207410 ~ 27216887 (+)
LOC103039637 NA coding upstream 953441 27197914 ~ 27205338 (+)
zbtb14 zbtb14,LOC107698704 coding downstream 695 28159733 ~ 28163252 (+)
LOC103043264 LOC107698705,LOC107728997,LOC108276921,LOC108432759 coding downstream 4778 28163816 ~ 28182133 (+)
LOC103040072 LOC108432760 coding downstream 53786 28212824 ~ 28226157 (+)
ppp4r1 ppp4r1,LOC106579644 coding downstream 83179 28242217 ~ 28268713 (+)
LOC103037774 NA coding downstream 139290 28298328 ~ 28301141 (+)
G93959 NA non-coding upstream 11286 28145826 ~ 28147493 (+)
G93882 NA non-coding upstream 649243 27508985 ~ 27509536 (+)
G93864 NA non-coding upstream 681589 27476918 ~ 27477190 (+)
G93856 NA non-coding upstream 721807 27436756 ~ 27436972 (+)
G93797 sh3bp5,sh3bp5b,LOC107588490,LOC107755668,LOC107704986,LOC107705532 non-coding upstream 864209 27267904 ~ 27294570 (+)
G93973 NA non-coding downstream 112109 28271147 ~ 28273486 (+)
G93979 ssr1 non-coding downstream 126518 28285556 ~ 28317908 (+)
G93981 NA non-coding downstream 128138 28287176 ~ 28288253 (+)
G93975 NA non-coding downstream 134934 28293972 ~ 28296031 (+)
G94002 LOC108432767,LOC108271151,LOC107705358,LOC107588508,LOC104959250 non-coding downstream 206569 28365607 ~ 28370263 (+)
LOC111193309 l3mbtl4,LOC108432753,LOC107698702,LOC107570871,LOC107728988,LOC107653885,LOC106590345 other upstream 218846 27919092 ~ 27939933 (+)
G93753 NA other upstream 1209900 26948463 ~ 26948879 (+)
LOC103034726 LOC108436089 other upstream 1766344 26267493 ~ 26392435 (+)
G93185 LOC105900568,LOC101883708 other upstream 2845072 25311877 ~ 25313707 (+)
G93135 NA other upstream 3193335 24914689 ~ 24965444 (+)
LOC103021747 rheb,LOC107653878,LOC106590380 other downstream 1050240 29209278 ~ 29326025 (+)
LOC103044382 NA other downstream 1091995 29251033 ~ 29346842 (+)
LOC111193374 NA other downstream 1097140 29256178 ~ 29256564 (+)
G94233 NA other downstream 1111265 29270303 ~ 29365656 (+)
G94241 NA other downstream 1223517 29382555 ~ 29383298 (+)

Expression


Co-expression Network