themis2


Basic Information

Item Value
gene id themis2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 19989458 ~ 20004543 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249601.3
gcttgccATTTCTTTGAATGGGCCACACTATTTCTCTATCAGTTTGTTGAAACTGGGGGTGAATGGTGGTGGGCAGAAATGCAAAAATGTCCTTTAATAGCTAATTTCCCCCATATGGTCATGTAGCTGCATCACttcatgtatttaaaataaaagttctcTTAAAGATTCTgcgtaaaataatgttttaggccaggaggaagaaacactgagaggaaccaagtCTTGAATGAGGAAGCTTCTTAAATGAGGAAGCCTCTTTTGGGCTGGGGCTAGATAGTAAGACCTGCAAATACAATATGTGCCTTTTGGACGTCTTTTTCCAAAAATGTGATTTGCAAAAGAAATTTAAAACTTAAAGATTTTGAAACACTTGGAACCTGTACTTCTATCCCTTTTGTTGCCTCCTGTATTAACTAGAGCAGTGGTTCTAAAATATGGTACACCAAAGTGGTACAccaccaaataaatattttttatgcatcAAAACCAACAGATAATACAAGCAAATGCATGTGGATAACATGGGAGGTTCAAGTCCCTGGGCCTTAAGACTTTGCCTTGTTTTATTGGAGACAGTTGCATATTGTCATTGTTGGATAAACACACAGTTTTGTCCAATGTCATAAATGTCAAAATGAAAGTAATTTTGCCGCATTTCTATTGGCGTGTGCATTTCAATATCATTCATTTatctatgtatttatattatatcagGATGTCCAACAGCATTATTACATATTGCATTTATTGTCCATATTGTTCACCCCTAGTTTGCTTGCATATATTCCTGTGGATACCTTTGACTTTTTTGTTTGATTGCAGGTGAAACACGGTCTAAAATATTTGAGAACCACTGAACCAGAGAATCACTTTTAATGCAACTTTGTTAGTCATGTCTGCAGTTGGCCCACAATGCAGCTGCTATGCTTTTAACTTGTACCATCCAGTCCTATAGCAACTTCTGTGACCAGAACAAGTTTTGTTCCTTAAACCTGACTTAGCTCATCTGTGACCTACCAGGCCTAGAAAGTGTTTTTGAGCTGAGAAATGACTTCAGACTGAATGACTCTTCAGTAAAGAGGTAGTACATAAAGATCACTATTTAGGCAAAAGGCCTGCCTCACATGACCTTGAGGTTTTTATACAACTACTGCTTCCTCATTCAGTCTCTATTTTCTTTAAACTGCTTCACAATCTTTTAAGAGATTTAAAAGTGGCCAACCCCATATCCACCAGACTTTTCCACATAACCCAAAAAGGATAGTGTTGTTATTTTTGATGGGCTCTTGGAAACTCACAGATCTGTGGCACAACAGTAAACTCTTaagctttttaacttttaaactaCAGATCTGCTTTGTGGACCACAATGACATGAACTGCTTTGTGGAATACAATGACCTGTGTATATCACTGCCTTTCCTGTGACAGACTATGGTTTGACATCCCACTTGGGAAATCACACCGTGCTACACCAAAAAGAGTCCTTGGGTACGACTCTTAAAACAGTGCTTGCTTTTATAATCTGATTAAGATGTTAGTCAGTCTGGAGAAGAGATTATTCTGCCCTACAGACTAGAAACAGGGCTGGTGTGACCATGCCTTTTCTTTTTCAGAAAAGCTTAGCTATTCTAAAGAAATCCAACATAACACTTcaattttgtaatttaaaatgtCTGTTTATCTAGTTATACctctatataattatattttcacTTCCAGTGCTTTCTACGTGCATTTTCCACTACGCAGTTTCATTTTCAAGTATCAGCAGAGAAATACTAATTTTGTTTTGCTGACTGGAATCGTCACCGTCATGCAAAACCCCCATCTTGTTTTAGCTTAAAATTGTAACACTCccaatgtcaatgtcaatttaaCACTAATATTAAATTGCCCAGTACAGTATTTCAGAATGTAAGATAAATGAGTAGACCAGTACAAATGCTCCAAATGGACTAGGAATGAAATCTTTTGTTACAGAGgaaatcaaaacatttttttatcctTCCTGTAAACATAGATGCTGTCTCAACAGTTTGACAACCTATTGATTTGGTGCCCACTAAATAGATTTATAGTCACaaattctataaaaaatagTATTCATTAAATGGATAATGGAATTTTGGAAAGTTGTCAAAAGGTATTATTATTTCCAAGAGGCAGTGTTAATGATGAGGTTGTGACTTTGTTGTTGATAACAAATAATGTCTGCAACCTCTGTGTTTGCTGAACTTCTACAGAgttcgtacggtcatgaaaaacctgggaaaagtcatggaatttgaacaTAGCAACTTCCAGTCCTGGAGaattctggaaaaataaaaactgccataatgttttggaaaagtcatggaaattttaataatttttttctgtttatcgaCTGAGAGAAGCTGTTTTGgttctaaacatttttttttttttacaaatttactttaaattagttAACTGGCTTCGTGGGTCCTTCTCTGACTGGAATTTTAGCTGCACTATAACTGTAAattcacacagagagaaaaatgaTAATGCTGTctattttcatttggaaaaaATGTAAGGCATAGATGTGTTTTTTCATCCATTTTAGGGAAGATAAAAGCCTACGTTTTTATatggatttttagttttattttccatgtcTGTACTGATGCTTTAAAGATGTAAAGATCGTGCAGCGACATGAAAAGACACGAAACAGTCATGGAATCTTATTGgttattaaaaattgtatgaACACATTTATATCCAGTAAAATATGCATACAGGAATACTACAGAGTCTCGGTGGTGTGTTGGAGCTGCAGTGATGAGATGATCTGAGAGAAGCCGCTGCTGCCGCTCGGTTGTGAAAGAGGCGTTTTAAGATGAACTCGCCTTACTAGGAAGTTCTCACAGGCGGGTTAGCTTTTAACGCTCATCCAGAAGTGAAGCGGAAACGGGCGAGGCGGCTCAGAGTTTTAAGACTTTCTGCGACATTAGCGAGCGTTTTGTCTTCTGCTGGGAGAGatatggaggaggaggagggagtgCTGGCCCTGCGGCAGTACATCTGCAGCCTGGACCCTGCGACTTTACCCCGCATCGTGCAGGTCTGCTCTGGGGTCTATTTCCAAGgCTCTATCTATGAGCTGTCGGGCAGTGAGGTGTGCCTGTCTACAGGAGACTTAGTGAAGATCATTGGTTTGGAGCTCCTGTCCGTGTGTTGTGAGGATATCGCCACCAACACCACATTTGAATTGCCTATGGAACATTCAGGTCTGTTCAAACTGGTTCCTGAGGAGTTCCCCTACAATACAATTGAAGAGATGGTAGGCCTGCAACCTGTTGGGGTGGACGCCTGTGGCTCCTTCATCTTTGTCAGTAGAAATGAATTAATCATAGAGAACTTCACAGTGTCTGCTGGAACAGAGATAACCCTGCTATCTGTGGAGGCTTTAGAAGATGGGAAGACCTATGCTCGCTGTCAGCTGATGGGCCAGCAGGGAGTTTCTGCAGAGGTGTTTATTCCCTTCTCATGCCATGGAGAGTTCTACGAGTGTGAGAATGAACGTGGCTACTCTTTGCAGGAGATCATGCTCTCAGACAGGCTGTGCAAGCGCCGCTTCCgcaaaacaaaatcaaagaaatgtggTGGTCCCTTGATTTTTACTCCCATCTACCAAGTCCAAGGAATCATGCACAtgagaaAGAATATTGTGAAGTTCCCCTCCAGTCTGGAAGTAGATGTAATTGATGTGACTGAACAGTGTAAAGATTTAACATTTGTAACTCCACTGTCCATGGCTGAGGTAGTCACTCAGCCTAAAGAGGCCTTTCCTACCATGGCCGAGATTCTGGAGGAGCCAGTGGCCAATCGTTTCTTTTGTAGCAGTTGGTTCAGTGAACTGCAAAAGGGCAAAAATCTTGTGTTGCACAAGTATATAAATGATACCCCACTGGTGTTAGCATGCACTCCTAAAGGAAGGAAGGCTCAACAATACTTCTTGATTTTAAGTGAATATGGTGGCCAAATGCGGAGAAGGGCAAGAGAGTTTAGCTCAGTATATGAGCTCTATGTtgctttctctcgctctcctgGCTTGAAAGTGAGTGTGACGAGACACTGTGAAGCCGTAGAAGAAGAAGGAGTACCTGCTCTTAGTGTGGGTGAGCAGCTGGAGGTCTTAAAATTACAGACAGTGGATGTGGCAGAAGGTGAATCGGGATCTACACAGAAAGTGGAGAGCCTGATCTGCAGAAGGATCAtggaggatgaggatgaggatgatgatgatgacgacgaCGAGGTGAATCAGGATGGGATGACAAAGGATACCTGCTTGCCTCTGTTCACTGAAGCCAATTTTGTAGAGACAATTTCTGACAAGAAAAAGTATTGTTTAGCAGAATTAGGAAAGAACTTTAGCTTACCCCTTGAAGTGAAAGTGGCAAGTCGCGATAAAACGCTGGAAAAAGACCCGCTGGCAGGGTTAACAGCACTGAAACTGGAAGAGGCTTTAAGCGAAACCATGGTGCTTGCTAGCCTGCCTGGCAGGCCAGAGCAATGCTTTGCATTACCAATCAACTGGTTACAAATGTCTCTCTCCTTCACCTCAGACCCGCTGCCCTGGGCGGATGGCCAAAATCCACAGCCTCACCTGGAGACAGTCATTGAAGTAACTGACCATTTCTACCATGAATATCACAGGTCTACACAGTCCAATATGGCTCCTCCTCCACGTCCTCCAAAACGCAAGCAAGCAtcacaaaaaaaccctaaatcACGTGCAAAGGCTAAAGCTGATACTGCCAACCCCAAAACTAACAAACTCACTGAAAATCTAGACAGCCTGTCTCTGAGCTGCACAAAATCCACTGAAAACAGGCGTGCTCCCCCACCTGTACCATCTGAATCTTCAGATAAACCCCCACCATTGGTACCTAGAAAGAGTTCCTCAGAAAGTTTCAGTACAACCAACACATATGTTCAGACCCcaagaaaacagaagaaaaagcaGCGGAACACAGCGAGGGCGTCCTCAGACAGTGACCATGACTATGAATCTGTGGAAGACATGCTAAATGTTCCTGACAGCATCATGTTTTACTAGCTCCGTAGGATCTATCAGGATGTGAGAAGAGTTAGCAGAATGTTTCTCAAAATATACATTTGAAGCTTTAATGGAAAAAGAAACAGTAAAGAATGCCAGTTTGTGAATAGCAAAATTAAACAAGAGTAAGATACTATTACAAAACAACAGTTTATTACAGAGAGGAAATGTTTTATGAACATAGACATTGTACTTTcatattaaaatagtttttcaaAAGCC

Function

NR:

description
PREDICTED: protein THEMIS2

GO:

id name namespace
GO:0016064 immunoglobulin mediated immune response biological_process
GO:0002250 adaptive immune response biological_process
GO:0002252 immune effector process biological_process
GO:0002253 activation of immune response biological_process
GO:0050896 response to stimulus biological_process
GO:0072376 protein activation cascade biological_process
GO:0006955 immune response biological_process
GO:0006956 complement activation biological_process
GO:0006958 complement activation, classical pathway biological_process
GO:0006959 humoral immune response biological_process
GO:0048583 regulation of response to stimulus biological_process
GO:0048584 positive regulation of response to stimulus biological_process
GO:0002376 immune system process biological_process
GO:0002682 regulation of immune system process biological_process
GO:0002684 positive regulation of immune system process biological_process
GO:0050776 regulation of immune response biological_process
GO:0050778 positive regulation of immune response biological_process
GO:0002443 leukocyte mediated immunity biological_process
GO:0002449 lymphocyte mediated immunity biological_process
GO:0002455 humoral immune response mediated by circulating immunoglobulin biological_process
GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains biological_process
GO:0019724 B cell mediated immunity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249601.3 True 5323 mRNA 0.41 6 19989458 20004543

Neighbor

gene id symbol gene type direction distance location
LOC103026527 LOC108433575 coding upstream 13150 19968250 ~ 19976308 (+)
LOC103035022 LOC108434176 coding upstream 478582 19504446 ~ 19510876 (+)
ebag9 ebag9,LOC107705161,LOC107666870,LOC107600620 coding upstream 514282 19464330 ~ 19475176 (+)
tmem42 tmem42 coding upstream 544718 19442306 ~ 19444740 (+)
LOC103034694 gpd1l,LOC103034694,LOC108434205,LOC107551192,LOC107600618,LOC107713825,LOC107705153,LOC107666803 coding upstream 551774 19429658 ~ 19437684 (+)
smpdl3b smpdl3b coding downstream 8232 20012775 ~ 20016592 (+)
LOC103030656 LOC108433585 coding downstream 120787 20125330 ~ 20130897 (+)
csf3r NA coding downstream 784820 20789363 ~ 20807856 (+)
mrps15 NA coding downstream 804389 20808932 ~ 20818821 (+)
oscp1 oscp1,oscp1b,LOC103033623,LOC107700711,LOC107755648 coding downstream 818135 20822678 ~ 20834496 (+)
G92111 ppp1r8,ppp1r8b,LOC107689150,LOC107688979,LOC106605108,LOC105903676 non-coding upstream 9258 19977487 ~ 19980200 (+)
G92104 NA non-coding upstream 32476 19956093 ~ 19956982 (+)
G92103 NA non-coding upstream 35365 19953546 ~ 19954093 (+)
G92054 hace1,LOC107679309 non-coding upstream 259483 19726890 ~ 19729975 (+)
G92044 eny2,LOC107600664,LOC107551183,LOC105908906 non-coding upstream 338371 19648673 ~ 19651087 (+)
G92134 yrdc non-coding downstream 54577 20059120 ~ 20063047 (+)
G92135 NA non-coding downstream 59450 20063993 ~ 20064597 (+)
G92141 NA non-coding downstream 79564 20084107 ~ 20085005 (+)
G92142 NA non-coding downstream 85287 20089830 ~ 20096957 (+)
G92231 NA non-coding downstream 238922 20243465 ~ 20244047 (+)
LOC103022253 lin28b,lin28a,LOC107744602,LOC107703899,LOC107732726,LOC107689005 other upstream 233983 19731812 ~ 19755475 (+)
LOC103028566 fez2 other upstream 1375741 18604038 ~ 18613717 (+)
lyplal1 lyplal1 other upstream 1482423 18494359 ~ 18507035 (+)
G91760 NA other upstream 1497386 18491680 ~ 18492072 (+)
G91748 NA other upstream 1568195 18400488 ~ 18421263 (+)
LOC103028233 maneal,LOC102777073 other downstream 39159 20043702 ~ 20057320 (+)
grik3 grik3,LOC100334689,LOC105019312,LOC106605119 other downstream 353006 20357549 ~ 20612284 (+)
LOC103032252 LOC103032252,LOC108433590,LOC107755659,LOC107588526,LOC107700712,LOC107704880,LOC107705924 other downstream 814384 20818927 ~ 20821390 (+)
stk40 stk40,LOC107755633,LOC107704982,LOC107588492 other downstream 835432 20839975 ~ 20860936 (+)
G92350 sh3d21 other downstream 936883 20941426 ~ 20945506 (+)

Expression


Co-expression Network