oscp1 (oscp1,oscp1b,LOC103033623,LOC107700711,LOC107755648)


Basic Information

Item Value
gene id oscp1
gene name oscp1,oscp1b,LOC103033623,LOC107700711,LOC107755648
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 20822678 ~ 20834496 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249625.3
AGCTTACCGACGCCTGCTGGTCCTGCTCGGCTTATTCTATTAGCGATAAATCCTCGCTCTGCTGCGGCAAACTGCAGCGATTCTCACCGCATTCTGCGTTAATTACACTACAGACAAGATGTCGACGAGAACACTGCCCTTGCTCTTCATTAATCTCGGCGGAGAAATGCTGTACATCCTGGATCAGCGCCTGCGAGCCCAGAACATACCTAGCGATAAAGCCAAGAAAGTCATGAATGACATCATTACCACTATGTTCAATAAGAAGTTTCTGGAGGAGCTGTTCAAACCTCAAGAACTGTATTCCAAGAAGGCCTTGAGGACAGTCTTTGATCGACTAGCCCATGCTTCAATAATGAGACTTAATCAAGCGAGTATGGACAAGCTTTATGACTTGATGACCATGGCATTCAAGTATCAAGTTCTTTTATGCCCTCGCCCTAAAGATATTCTCCTTGTGACCTTCAACCATATGGATGCAATCAAAGACTTTGTAAGGGACACCCCCAGTATTCTAAGCCAAGTGGACGAAACTTACAGACAACTCCTAGAGATATATACTTCTTTGTCTGGTGGAGAATTTCAGTTAATTAGACAAACGTTACTCATCTTCTTTCAAGATATGCACATAAGAGTGTCTATATTTCTAAAAGACAAAGTGCAAAACTCCAATGGACGCTTTGTACTGCCCACTTCAGGACCTGTTCCATATGGCACTCAAACTCCTGGACTTATCAGAATGTTTAGCTGTAGTGGTGAGGAGATAAAGAGGGTACAGTTCCGAGATGGAGGAAACTACACTGCTGCCCTTCGTGAGGGTTCCTTTGAGTTATTTGGTGACAGAGTTACTAAACTGGGCACAAACATGTATAGTGTGAGCCGTCCTGTGGAGACACACATGTCTGGAACCTCCAAAAATTCTTCACAACACACCAAGGTTAACACACTACCAAACCCACTGGCAAAGGAGGAACTAAATCTGCTTGCTAAACTAATGGGTGGTTTGGAGGTTCAGAAGCCAAGTCACACTGACTCGGGTTTTCGTGTCAACCTCTTTGCAACGGATGAAGAAGAAGAGGAAGCTTTGATAACGAGACCAGAGGAGCTCTCTTATGAAGTTATTAATATCCAAGCAACCAAGGACAAACAGGCCAATGCTGAGTTGGCAAAGATCATGGGAGAGTTTACAGAAGCTGGAGACTCTTCCCCAAGCTCTAGCAGCAAAGGGGATGACCTGTTGGCTATGATGGATGGCCTGTGATGCGGAGTATATGCAGTACATGTTGGCTGCTGTTAAGCAGGCTTAGTACTGCTTGAAGCTCCACAGTGTCTCGCTCAGAGAGCCTAGAGACCTGCTATGTCACACGACAGCAACACATGGAGGCtaatatgtgtttgtgttggtaGAGTCGATCATGGTCAGACACTGTTCATCTTGTTTCAGCCTTTAACCTTTCTGAGATCTTTTATTCTTGGCCCAGTTTTTTAAAAGCTTCATAGTGTCAAGATCATCTTAAAAGAGTGTTTCACTCTATCCTCAATGATCTTTGTCCTAAGGGACTTTTGGAAGACCGAGCCCTGATGATCAGTTACAGTGCAATCCTGTTCTATAGCTTTATGTACATTTCCAGATCTTTCAAGTCCAGACGCTACAAGTCACTTTACAAAACTCTCTATAGTTCCATCAACATGGATGGCCTAAAACACTGGTAAGGGTCATGGATCATGCAGTAACGTAAGGAGGTAAAAAACAGTCAACCACATCAGCAGTGTGTGACAGTTTGTATTTCCTATTCAATACTCTTGTGCTGGGAGTattaataagtgtgtgtgtgtgtgtgtggccaacTACACTATTATGGTATATAACATTAGTGGCCACTTATAACATGAGTTAGTCCCACGTGGGATAGAATAGTCATGCACAGTAACTCGTTGACTCAGTATAACGACATGCCTGACAGGAAAATAATTGGCTTAGATATACTAAAAACACTcttcaatttaaataaatcttattaAACTATGCAGATATCTTAGGGCTAACCTCATATTGGCATGTGCCACAGCCCAACAACTGGCTTAGATGCACTCAAAATACCACAGAAGATGAGTGAGATTAGCCGTGGCTGTACAGTTTcatgacatttatttaaattgcagGTCAAATAagtgtgtatatttttgtacatactgtatttgCACATTCATATATATGATCATTGCTGACCTTTTTGTATATTTGGATTGTTTTGTGATtggatttagaaaaaaaaacattctctgGCCAGCAATGTGCACACACCTGAGATATATTGAAGAGAACACAGATTGATCTTTTTTAAAGTGTCAATAGATGTCTCAGAATACAGCTCATAAATGGAATTAATTTTACAAATAGAtaattattaagatatattaAGACAAGGAAAACTGAAAAGCTGCTGAGAAGCCTGGCAGAAACCTAAGTGCACTTGTCTTGATTGTTTAGCACAGATCAGATCCTTCATTTGAcatgttttgtgtttaaaagtaCATTTGTCTGTATGCAGGTTCATATCTCCCTTTAAGAAAGTACCTCTAGAAGAGTTGTTGCGGTATCTGACTGTGCAGATGTTGAGATTAGAAGGGAGGTGTTACACATACTTACAATAATGTTCAACTTTTTAATGAAACATGTTTGATGGGactaaatgtgtatattttttcaGGTGTATAGAAGGTTGATactttattaaagattgtggTATTGCCTACTGAGGTTTGGATGtattttctgttgtgttttgttgggATATTACTATGAATTAGTTCCATTTCAAATAAATGTGGAACCATA
>XM_022673743.1
GAGAGCTTACCGACGCCTGCTGGTCCTGCTCGGCTTATTCTATTAGCGATAAATCCTCGCTCTGCTGCGGCAAACTGCAGCGATTCTCACCGCATTCTGCGTTAATTACACTACAGACAAGATGTCGACGAGAACACTGCCCTTGCTCTTCATTAATCTCGGCGGAGAAATGCTGTACATCCTGGATCAGCGCCTGCGAGCCCAGAACATACCTAGCGATAAAGCCAAGAAAGTCTTTGTAGCCACTGTAGCAGAATGGATAGAGGAGGACAGAAAAAGAGTCATGAATGACATCATTACCACTATGTTCAATAAGAAGTTTCTGGAGGAGCTGTTCAAACCTCAAGAACTGTATTCCAAGAAGGCCTTGAGGACAGTCTTTGATCGACTAGCCCATGCTTCAATAATGAGACTTAATCAAGCGAGTATGGACAAGCTTTATGACTTGATGACCATGGCATTCAAGTATCAAGTTCTTTTATGCCCTCGCCCTAAAGATATTCTCCTTGTGACCTTCAACCATATGGATGCAATCAAAGACTTTGTAAGGGACACCCCCAGTATTCTAAGCCAAGTGGACGAAACTTACAGACAACTCCTAGAGATATATACTTCTTTGTCTGGTGGAGAATTTCAGTTAATTAGACAAACGTTACTCATCTTCTTTCAAGATATGCACATAAGAGTGTCTATATTTCTAAAAGACAAAGTGCAAAACTCCAATGGACGCTTTGTACTGCCCACTTCAGGACCTGTTCCATATGGCACTCAAACTCCTGGACTTATCAGAATGTTTAGCTGTAGTGGTGAGGAGATAAAGAGGGTACAGTTCCGAGATGGAGGAAACTACACTGCTGCCCTTCGTGAGGGTTCCTTTGAGTTATTTGGTGACAGAGTTACTAAACTGGGCACAAACATGTATAGTGTGAGCCGTCCTGTGGAGACACACATGTCTGGAACCTCCAAAAATTCTTCACAACACACCAAGGTTAACACACTACCAAACCCACTGGCAAAGGAGGAACTAAATCTGCTTGCTAAACTAATGGGTGGTTTGGAGGTTCAGAAGCCAAGTCACACTGACTCGGGTTTTCGTGTCAACCTCTTTGCAACGGATGAAGAAGAAGAGGAAGCTTTGATAACGAGACCAGAGGAGCTCTCTTATGAAGTTATTAATATCCAAGCAACCAAGGACAAACAGGCCAATGCTGAGTTGGCAAAGATCATGGGAGAGTTTACAGAAGCTGGAGACTCTTCCCCAAGCTCTAGCAGCAAAGGGGATGACCTGTTGGCTATGATGGATGGCCTGTGATGCGGAGTATATGCAGTACATGTTGGCTGCTGTTAAGCAGGCTTAGTACTGCTTGAAGCTCCACAGTGTCTCGCTCAGAGAGCCTAGAGACCTGCTATGTCACACGACAGCAACACATGGAGGCtaatatgtgtttgtgttggtaGAGTCGATCATGGTCAGACACTGTTCATCTTGTTTCAGCCTTTAACCTTTCTGAGATCTTTTATTCTTGGCCCAGTTTTTTAAAAGCTTCATAGTGTCAAGATCATCTTAAAAGAGTGTTTCACTCTATCCTCAATGATCTTTGTCCTAAGGGACTTTTGGAAGACCGAGCCCTGATGATCAGTTACAGTGCAATCCTGTTCTATAGCTTTATGTACATTTCCAGATCTTTCAAGTCCAGACGCTACAAGTCACTTTACAAAACTCTCTATAGTTCCATCAACATGGATGGCCTAAAACACTGGTAAGGGTCATGGATCATGCAGTAACGTAAGGAGGTAAAAAACAGTCAACCACATCAGCAGTGTGTGACAGTTTGTATTTCCTATTCAATACTCTTGTGCTGGGAGTattaataagtgtgtgtgtgtgtgtgtggccaacTACACTATTATGGTATATAACATTAGTGGCCACTTATAACATGAGTTAGTCCCACGTGGGATAGAATAGTCATGCACAGTAACTCGTTGACTCAGTATAACGACATGCCTGACAGGAAAATAATTGGCTTAGATATACTAAAAACACTcttcaatttaaataaatcttattaAACTATGCAGATATCTTAGGGCTAACCTCATATTGGCATGTGCCACAGCCCAACAACTGGCTTAGATGCACTCAAAATACCACAGAAGATGAGTGAGATTAGCCGTGGCTGTACAGTTTcatgacatttatttaaattgcagGTCAAATAagtgtgtatatttttgtacatactgtatttgCACATTCATATATATGATCATTGCTGACCTTTTTGTATATTTGGATTGTTTTGTGATtggatttagaaaaaaaaacattctctgGCCAGCAATGTGCACACACCTGAGATATATTGAAGAGAACACAGATTGATCTTTTTTAAAGTGTCAATAGATGTCTCAGAATACAGCTCATAAATGGAATTAATTTTACAAATAGAtaattattaagatatattaAGACAAGGAAAACTGAAAAGCTGCTGAGAAGCCTGGCAGAAACCTAAGTGCACTTGTCTTGATTGTTTAGCACAGATCAGATCCTTCATTTGAcatgttttgtgtttaaaagtaCATTTGTCTGTATGCAGGTTCATATCTCCCTTTAAGAAAGTACCTCTAGAAGAGTTGTTGCGGTATCTGACTGTGCAGATGTTGAGATTAGAAGGGAGGTGTTACACATACTTACAATAATGTTCAACTTTTTAATGAAACATGTTTGATGGGactaaatgtgtatattttttcaGGTGTATAGAAGGTTGATactttattaaagattgtggTATTGCCTACTGAGGTTTGGATGtattttctgttgtgttttgttgggATATTACTATGAATTAGTTCCATTTCAAATAAATGTGGAACCATA

Function

symbol description
oscp1b Orthologous to human OSCP1 (organic solute carrier partner 1).
oscp1 Enables transmembrane transporter activity. Involved in xenobiotic detoxification by transmembrane export across the plasma membrane. Located in basal plasma membrane and cytoplasm.

NR:

description
PREDICTED: protein OSCP1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249625.3 False 2839 mRNA 0.40 10 20822681 20834496
XM_022673743.1 True 2890 mRNA 0.40 11 20822678 20834496

Neighbor

gene id symbol gene type direction distance location
mrps15 NA coding upstream 3857 20808932 ~ 20818821 (+)
csf3r NA coding upstream 14822 20789363 ~ 20807856 (+)
LOC103030656 LOC108433585 coding upstream 691781 20125330 ~ 20130897 (+)
smpdl3b smpdl3b coding upstream 806086 20012775 ~ 20016592 (+)
themis2 NA coding upstream 818135 19989458 ~ 20004543 (+)
LOC103035107 eva1b,eva1ba,LOC108269790,LOC106605123 coding downstream 67701 20902197 ~ 20920794 (+)
LOC103036967 scmh1,LOC107755513,LOC107705663,LOC107556091,LOC107704976 coding downstream 270284 21104780 ~ 21118198 (+)
ctps1 ctps1,ctps1b,LOC108433599,LOC107704971,LOC106584221 coding downstream 362012 21196508 ~ 21204964 (+)
taf12 taf12,LOC107700725,LOC107705731,LOC107566933,LOC107755488,LOC107588503 coding downstream 371471 21205967 ~ 21209878 (+)
LOC103043722 NA coding downstream 418980 21253476 ~ 21262157 (+)
G92289 NA non-coding upstream 145504 20676966 ~ 20677174 (+)
G92238 NA non-coding upstream 507092 20315259 ~ 20315586 (+)
G92236 NA non-coding upstream 507967 20314271 ~ 20314711 (+)
G92231 NA non-coding upstream 578631 20243465 ~ 20244047 (+)
G92142 NA non-coding upstream 725721 20089830 ~ 20096957 (+)
G92335 NA non-coding downstream 39581 20874077 ~ 20874768 (+)
G92343 NA non-coding downstream 90962 20925458 ~ 20928621 (+)
G92351 NA non-coding downstream 112701 20947197 ~ 20950408 (+)
G92358 NA non-coding downstream 166337 21000833 ~ 21006480 (+)
G92378 NA non-coding downstream 246096 21080592 ~ 21083749 (+)
LOC103032252 LOC103032252,LOC108433590,LOC107755659,LOC107588526,LOC107700712,LOC107704880,LOC107705924 other upstream 1288 20818927 ~ 20821390 (+)
grik3 grik3,LOC100334689,LOC105019312,LOC106605119 other upstream 210394 20357549 ~ 20612284 (+)
LOC103028233 maneal,LOC102777073 other upstream 765358 20043702 ~ 20057320 (+)
LOC103022253 lin28b,lin28a,LOC107744602,LOC107703899,LOC107732726,LOC107689005 other upstream 1067203 19731812 ~ 19755475 (+)
LOC103028566 fez2 other upstream 2208961 18604038 ~ 18613717 (+)
stk40 stk40,LOC107755633,LOC107704982,LOC107588492 other downstream 5479 20839975 ~ 20860936 (+)
G92350 sh3d21 other downstream 106930 20941426 ~ 20945506 (+)
G92462 ptprub,LOC107705793,LOC107588504 other downstream 434669 21269165 ~ 21352003 (+)
G93079 NA other downstream 3863637 24698133 ~ 24708374 (+)
G93135 NA other downstream 4080193 24914689 ~ 24965444 (+)

Expression


Co-expression Network