G92289


Basic Information

Item Value
gene id G92289
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 20676966 ~ 20677174 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU124103
gcggagcggagctgacggtctgttattggtcccgcccataagcagcccttttacaataaccacacctttttttaatagagctgaataacgttttaaaaaacgaattctgtggggatataaaaatttgacaatataagcagaggttacactagctgttgcatttaaataatggaggtagaattacagtatattagaaaaaaacgtgattg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124103 True 209 lncRNA 0.37 1 20676966 20677174

Neighbor

gene id symbol gene type direction distance location
LOC103030656 LOC108433585 coding upstream 546069 20125330 ~ 20130897 (+)
smpdl3b smpdl3b coding upstream 660374 20012775 ~ 20016592 (+)
themis2 NA coding upstream 672423 19989458 ~ 20004543 (+)
LOC103026527 LOC108433575 coding upstream 700658 19968250 ~ 19976308 (+)
LOC103035022 LOC108434176 coding upstream 1166090 19504446 ~ 19510876 (+)
csf3r NA coding downstream 112189 20789363 ~ 20807856 (+)
mrps15 NA coding downstream 131758 20808932 ~ 20818821 (+)
oscp1 oscp1,oscp1b,LOC103033623,LOC107700711,LOC107755648 coding downstream 145504 20822678 ~ 20834496 (+)
LOC103035107 eva1b,eva1ba,LOC108269790,LOC106605123 coding downstream 225023 20902197 ~ 20920794 (+)
LOC103036967 scmh1,LOC107755513,LOC107705663,LOC107556091,LOC107704976 coding downstream 427606 21104780 ~ 21118198 (+)
G92238 NA non-coding upstream 361380 20315259 ~ 20315586 (+)
G92236 NA non-coding upstream 362255 20314271 ~ 20314711 (+)
G92231 NA non-coding upstream 432919 20243465 ~ 20244047 (+)
G92142 NA non-coding upstream 580009 20089830 ~ 20096957 (+)
G92141 NA non-coding upstream 591961 20084107 ~ 20085005 (+)
G92335 NA non-coding downstream 196903 20874077 ~ 20874768 (+)
G92343 NA non-coding downstream 248284 20925458 ~ 20928621 (+)
G92351 NA non-coding downstream 270023 20947197 ~ 20950408 (+)
G92358 NA non-coding downstream 323659 21000833 ~ 21006480 (+)
G92378 NA non-coding downstream 403418 21080592 ~ 21083749 (+)
grik3 grik3,LOC100334689,LOC105019312,LOC106605119 other upstream 64682 20357549 ~ 20612284 (+)
LOC103028233 maneal,LOC102777073 other upstream 619646 20043702 ~ 20057320 (+)
LOC103022253 lin28b,lin28a,LOC107744602,LOC107703899,LOC107732726,LOC107689005 other upstream 921491 19731812 ~ 19755475 (+)
LOC103028566 fez2 other upstream 2063249 18604038 ~ 18613717 (+)
lyplal1 lyplal1 other upstream 2169931 18494359 ~ 18507035 (+)
LOC103032252 LOC103032252,LOC108433590,LOC107755659,LOC107588526,LOC107700712,LOC107704880,LOC107705924 other downstream 141753 20818927 ~ 20821390 (+)
stk40 stk40,LOC107755633,LOC107704982,LOC107588492 other downstream 162801 20839975 ~ 20860936 (+)
G92350 sh3d21 other downstream 264252 20941426 ~ 20945506 (+)
G92462 ptprub,LOC107705793,LOC107588504 other downstream 591991 21269165 ~ 21352003 (+)
G93079 NA other downstream 4020959 24698133 ~ 24708374 (+)

Expression


Co-expression Network