LOC103024740 (LOC103024740,LOC108413681)


Basic Information

Item Value
gene id LOC103024740
gene name LOC103024740,LOC108413681
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 12730626 ~ 12735104 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244688.2
TTACATACAAATCTGTAcctatttttcttagtgtgtactaCCATAAAAAGAGAAACATCAAGACTAGGTAATCACAGAGGGGCAAAGTaatgcaatgcaaaacattaaaaatacatacatgtaATTTTAGGAAAATTACAGGTGGAAACTTTGtagattttatttcttaatagaATGTAAGCAGATTTTCTAGAGTAGCACATTGGGATTGTTCGAGTAATACCAGAGAACCACTGGGTTAGAACATTGTGTTAAGTTCTTCCGCAGGAGAGAATTTGATTGAAATTAAAGTTCCTGTGGAGTTTCTgtggttcagttcagttcattgtgtgtgtgagggaataAGTGACGTCAGGTTAATAATATAAGGCACCCCGCTCCCTCTCTCGCGCTCCTACAGTGTCCCCTCTCTGCGCGTTACGCACGCGGTGCGCTCTTAGTTCAGCCTTCTCCTGTCCTCGCGCTCATCTCTTTCCATTGCGCGGTAACCGGCGCGTGAATGCGCGCGGTGAGGAGAAGATAATAAGAGACCCGTGAGCGCGCGCGCGGCTTTCATGGTGGTCGGCGACGCGAACAGGACCACGGGTTACGGAGAGAGCGCGCGCTCGCTCATGGCGGAGGCGCGCGCGCGGGAGCCTGGCGCGCACGTGGCAAGCGCGAGGATCGCGGAGGCGCTGCTGCTTCCACGGCTCTTGGAGCTCGCGCACGACGGCGGCGGCGGAATTGGCATCGGCGGGGATCGCGTGCCCTCCGTCGCACACATGCCCGCGCACACGCCCGGCTCCGCAGCTTCGGACATGCTGGGACCCTCTGCGCTCGAGCCGAGCCTCGTGATGGCCGCGGCCAACCGCACGCGCTGCGCCGAGCAGATCCTGAGCTACGGCGGCGCGGAGAAGGTGCTGATCGGTGCCGTGCTCACCGCGCTCACGCTCAGCACCATCTGCGGCAACGTGCTCGTGCTGGTGTCCGTGTGCTTCGTGAAGAAGCTGCGGCAGCCCTCCAACTACCTGATTGTGTCGCTCGCGCTCGCGGATCTGTCCGTTGCGCTCGCGGTCATGCCCTTCGTCAGCATCACGGACCTGATCGGCGGCCGCTGGATCTTCGGACAGTTCTTCTGCAACGTCTTCATCGCCATGGACGTGATGTGCTGCACAGCGTCCATCATGACGCTCTGCGTGATCAGCATCGACAGATACCTGGGTATCACCAGACCCTTGACATACCCGGTGCGGCAGAACGGCTGGTGCATGGCAAAAATGGTCCTCTCTGTTTGGCTGCTCTCTGCGTCCATCACCCTGCCGCCGCTATTCGGTTGGGCGCAGAATGTAAATGACGACAAggtgtgcctgatcagccaggACTTCGGCTACACCATCTATTCCACGGCTGTGGCATTCTACATCCCCATGACGGTCATGCTAATCATGTACTACCGCATCTACCGGGCAGCCAAGCTAAGTGCAGCCAAGCACACCATCACCGGCTTCCCGCGGCCGGAGAAGAACAGGCAGGATGAGGTGGATGAGGACGAGGAGGACCCTGGAGACGGCTCAGAGGTGTCAACAGGCGTGGACTGTGTTACTGTTGCGATGAAGCTGCACAGGGAAGTGGAGGAGTGTGCCCGGTTGCCTCGTCTCTTGCGGGGAATTGGCGGTGGCTCCTCTGACCGCAAGAGCATCTCCATCTTCAAGCGGGAGCAGAAAGCAGCAGCCACTCTGGGGGTTGTAGTGGGGGCCTTCAGCTTCTGCTGGCTGCCCTTCTTTCTGTTGTCCACCACCCGGCCCTTCGTGTGTGGGACGGAGTGCAGCTGTGTGCCGCTGTGGGTTGAGAGGACCCTGCTATGGTTGGGCTACGCCAACTCGCTCATCAACCCCTTCATCTACGCCTTCTTCAACCGCGACCTGCGCACCACCTACCGCAGCCTCCTGAGCTGCCGCTACCGCAACATCAACCGCAGGCTATCAGCGGTTGGCATGCACGAGGCTCTGCGGCTGGTGGAGAGGCCTGAGACCACGGTGTCTGGGTGACCTTGGCTTACAAAAAGGGAAAAAGCATGAAGCTGCAAAACTCAAGCGGAAAAAAACGCTGAAAGACTTCAGGATTCCAGAGCTTGACAGGGCCATGGAACACAGCAGGGTTTCAAGCATCATTATGAGGACCCTTGTAAGGTTTTCTAAAGAGAAGTCCAGATATCCAGCTTTACTCTTGAGCTTTCTGCGATGGCATGGAACACTTGGTCCTGATGATTTTTTAGAGTCTTGCGTCTTTTGAACATCTTTGAAACAGGGATGCCCAACAAGGATGCTGAACTCTTGAACTCATAACTGaaccaaacaaataaatgtCATGACATGCTCAAGAAAATATGATGATCTGCATAGAGGGTTCCTGCTATAATGATGGACCAAGCAGTGGACTTGATTCCCCAAACAGTTTTGGGTCAATTGGGTCATTATTTGTGCTTTTCCAGTTGAGCAAGTATCTTTTAAGGCTTGATCACATCTGGCATTAACATTGTTTTGTATAAAAGCACATCATCACATCCCATCATCAAAGGTGTCAAATGTATtctcattcattactctgtagaagtatagatactagggtttaaaatacttctggagatgttgaagtatca

Function

NR:

description
5-hydroxytryptamine receptor 7-like

GO: NA

KEGG:

id description
K04163 HTR7; 5-hydroxytryptamine receptor 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244688.2 True 2638 mRNA 0.54 2 12730626 12735104

Neighbor

gene id symbol gene type direction distance location
yipf4 yipf4,LOC107744423,LOC107670878,LOC106576945 coding downstream 205789 12519463 ~ 12524837 (-)
birc6 NA coding downstream 229342 11393761 ~ 12501284 (-)
rlf NA coding downstream 579910 12125827 ~ 12150716 (-)
pdzd8 pdzd8 coding downstream 922044 11642590 ~ 11808582 (-)
ttc27 ttc27,LOC107689788 coding downstream 1367418 11220363 ~ 11363208 (-)
LOC103046657 NA coding upstream 86811 12821915 ~ 12835548 (-)
LOC103047466 papss2a,papss2,LOC108411876,LOC105900838,LOC107715960,LOC107583551,LOC107553500,LOC107670849,LOC107689802 coding upstream 186656 12921760 ~ 12950947 (-)
LOC103025372 LOC103025372 coding upstream 221266 12956370 ~ 12967635 (-)
znf593 znf593 coding upstream 303933 13039037 ~ 13048574 (-)
LOC103026300 map4k3,LOC105006890,LOC107715980,LOC107654892,LOC105893436 coding upstream 357627 13092731 ~ 13135979 (-)
G80060 NA non-coding downstream 146765 12583233 ~ 12583861 (-)
G80047 NA non-coding downstream 187354 12540145 ~ 12543272 (-)
G79960 pgrmc2,LOC108438735,LOC107711856,LOC107721516,LOC107654846,LOC107668512 non-coding downstream 356172 12223279 ~ 12374454 (-)
G79991 NA non-coding downstream 365664 12364110 ~ 12364962 (-)
G79974 NA non-coding downstream 447716 12281860 ~ 12282910 (-)
G80105 pank1,pank1a,LOC107689800,LOC107553481 non-coding upstream 47509 12782613 ~ 12791587 (-)
G80125 slc16a12,slc16a12a,LOC107689836,LOC107715954,LOC107744897,LOC107583546 non-coding upstream 83285 12818389 ~ 12818642 (-)
G80168 NA non-coding upstream 178095 12913199 ~ 12975300 (-)
G80239 NA non-coding upstream 283839 13018943 ~ 13087370 (-)
G80243 NA non-coding upstream 314659 13049763 ~ 13051013 (-)
edaradd edaradd other downstream 116895 12585162 ~ 12613731 (-)
ncmap NA other downstream 357822 12334399 ~ 12372804 (-)
G79945 NA other downstream 538598 12157586 ~ 12192028 (-)
G79865 NA other downstream 758687 11969441 ~ 11971939 (-)
ltbp1 ltbp1 other downstream 1546685 10941687 ~ 11183941 (-)
LOC103046962 ptena,LOC108411875,LOC107670848,LOC101171856,LOC105900832,LOC105940225,LOC104929647,LOC103387686 other upstream 136885 12871989 ~ 12912395 (-)
selenon selenon,sepn1 other upstream 286013 13021117 ~ 13037306 (-)
LOC111193198 NA other upstream 440932 13176036 ~ 13176676 (-)
LOC103027799 rgs7a,LOC108431643,LOC107583631,LOC107668625,LOC107750853,LOC108269497 other upstream 1090963 13826067 ~ 13919850 (-)
LOC111193139 NA other upstream 1220737 13955841 ~ 13956580 (-)

Expression


Co-expression Network