G14463


Basic Information

Item Value
gene id G14463
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 29274961 ~ 29275432 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU19392
TCatattacacacaacacacttatACCCATATCAACACTCTTATACCCATATCACATTATACACTTCAACATTTACTTATTTCCCACCTGGATAAAAGGATGAAGAAAGACGCGTTCAGCAATCATCTGACAGGCAGTACCTGTTATCCCAGAGCCACACTCTAGCGCCCCGCATTAAGTTGGGGCGTGTCTAACGTCTGACGTCACACGAGCGTTCTTTTGGCAAcattttacttgaatttctttagtTAATGTAATGATGACAACATTTCAGTAATTTTTACTACAGTTACTACAGTTAAATTTACTGAATGTATTTAACTAAATGGGAAGACACACAATTACGCAGAAACTCCAAGTATTACACTGaattatacattacatttttgagtAATTCTCAGAATTGATGTTTTCATGTAGAAATTACTTTAATTGTCCTTGTTGTATTTACAAAgtcaaaaaatcatttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19392 True 472 lncRNA 0.34 1 29274961 29275432

Neighbor

gene id symbol gene type direction distance location
c2h16orf72 cunh16orf72,c2h16orf72,zgc:66160,LOC103025273,LOC105900007,LOC107590581,LOC107738628,LOC107685917 coding upstream 266576 29000911 ~ 29008385 (+)
LOC103024010 LOC106597007 coding upstream 311138 28951471 ~ 28963823 (+)
LOC103022544 pde6g,LOC108432842,LOC107733865,LOC107690252 coding upstream 372457 28901023 ~ 28902504 (+)
LOC103022852 arhgdib,gdir2,LOC108432841,LOC107590585,LOC107685923,LOC107568023,LOC106601960 coding upstream 384032 28828602 ~ 28890929 (+)
dnase1 dnase1l2 coding upstream 453120 28814118 ~ 28821841 (+)
atf7ip2 atf7ip2 coding downstream 318464 29593896 ~ 29610385 (+)
ciita NA coding downstream 450881 29726313 ~ 29757199 (+)
clec16a clec16a coding downstream 486546 29761978 ~ 29864484 (+)
pigq pigq,LOC107690265,LOC107733876,LOC107590576 coding downstream 620120 29895552 ~ 29907786 (+)
rab40c rab40c,LOC107567894,LOC107685905,LOC107590575,LOC103366693,LOC107690266 coding downstream 637810 29913242 ~ 29942259 (+)
G14462 NA non-coding upstream 200 29274415 ~ 29274761 (+)
G14459 NA non-coding upstream 14742 29260018 ~ 29260219 (+)
G14443 NA non-coding upstream 147283 29127466 ~ 29127678 (+)
G14429 NA non-coding upstream 210223 29064519 ~ 29064738 (+)
G14377 NA non-coding upstream 263926 28952651 ~ 29011035 (+)
G14465 NA non-coding downstream 9941 29285373 ~ 29285707 (+)
G14481 NA non-coding downstream 120485 29395917 ~ 29397747 (+)
G14482 NA non-coding downstream 120946 29396378 ~ 29397157 (+)
G14477 NA non-coding downstream 123872 29399304 ~ 29401251 (+)
G14483 NA non-coding downstream 129727 29405159 ~ 29422851 (+)
G14444 NA other upstream 145588 29129067 ~ 29129373 (+)
rbfox1 rbfox1 other upstream 667872 28112046 ~ 28607089 (+)
LOC103031366 LOC105899914 other upstream 1197143 28050129 ~ 28077818 (+)
G14047 NA other upstream 2234432 27009548 ~ 27040529 (+)
LOC103023549 gpr171 other upstream 3479877 25788584 ~ 25795084 (+)
G14480 NA other downstream 119728 29395160 ~ 29398166 (+)
nubp1 nubp1,LOC107690260,LOC107685912 other downstream 398678 29674110 ~ 29720592 (+)
G14505 NA other downstream 457873 29733305 ~ 29742723 (+)
G14638 rps15a,MGC114789,RPS15A,LOC107686992 other downstream 985245 30260677 ~ 30268382 (+)
LOC103032125 NA other downstream 1463612 30739044 ~ 30772153 (+)

Expression


Co-expression Network