G36550


Basic Information

Item Value
gene id G36550
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 15199822 ~ 15200037 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU49176
gactgatttagatctatagttccccaggtggcatgtaagggttttcagtagttaatgttgatttgagcagtaattaatgaatagttattataaaggagacataattagtaagtagttctctgggagatatgtaagtctcagtaattattgtggagttattagtgaactactataatcattagttcagtactatctactgagtaattattcagtact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49176 True 216 lncRNA 0.31 1 15199822 15200037

Neighbor

gene id symbol gene type direction distance location
LOC103031644 LOC108424598 coding downstream 84710 15094604 ~ 15115112 (-)
med24 med24,LOC107660474,LOC107678252 coding downstream 114800 15040534 ~ 15085022 (-)
trnal-caa_19 NA coding downstream 243065 14956645 ~ 14956757 (-)
trnal-caa_18 NA coding downstream 243472 14956238 ~ 14956350 (-)
trnal-caa_17 NA coding downstream 243878 14955832 ~ 14955944 (-)
psmc5 psmc5,LOC107745657,LOC107753303 coding upstream 341063 15541100 ~ 15547570 (-)
smarcd2 smarcd2,LOC107569192,LOC107684754 coding upstream 352554 15552591 ~ 15565917 (-)
LOC103026640 si:dkeyp-118b1.2,LOC103026640,LOC108410802,LOC107694074,LOC107745658,LOC108273584,LOC105909120,LOC107684755 coding upstream 372743 15572780 ~ 15580758 (-)
LOC103026344 LOC108410807,LOC106579091,LOC107569191,LOC105909101,LOC105006181 coding upstream 382588 15582625 ~ 15611422 (-)
LOC103025516 NA coding upstream 523222 15723259 ~ 15737075 (-)
G36542 NA non-coding downstream 50466 15148403 ~ 15149356 (-)
G36477 NA non-coding downstream 322744 14832969 ~ 14877078 (-)
G36428 NA non-coding downstream 421427 14749553 ~ 14778395 (-)
G36417 NA non-coding downstream 494591 14704543 ~ 14705231 (-)
G36396 NA non-coding downstream 629836 14552745 ~ 14569986 (-)
G36632 NA non-coding upstream 182475 15382512 ~ 15454810 (-)
G36629 ki67 non-coding upstream 192974 15393011 ~ 15397037 (-)
G36634 NA non-coding upstream 207423 15407460 ~ 15412008 (-)
LOC111192377 NA non-coding upstream 314821 15514858 ~ 15527297 (-)
G36657 NA non-coding upstream 348842 15548879 ~ 15549079 (-)
c4h10orf88 LOC103041415 other downstream 402610 14785952 ~ 14797212 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other downstream 1699645 13475166 ~ 13500177 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other downstream 1888297 13307088 ~ 13311525 (-)
G36074 NA other downstream 2488277 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 3127395 12067533 ~ 12072427 (-)
G36677 NA other upstream 547363 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 637068 15837105 ~ 15840516 (-)
LOC103043629 LOC108412394 other upstream 1713533 16913570 ~ 16915285 (-)
G37183 NA other upstream 1816091 17016128 ~ 17018918 (-)
crym rac1,RAC1,rac1a,crym,LOC105898786,LOC108412270,LOC108437155,LOC107569188 other upstream 1847570 17047607 ~ 17062947 (-)

Expression


Co-expression Network