G37186


Basic Information

Item Value
gene id G37186
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17026457 ~ 17026942 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50116
ccgtCAGTCTTCCCCTTACCCCTGTGATCAGAGCCTGGGATGTGCAGTGGttggaagagaaaaagaaatgcaGAATTTGCATGTAACCAAGGCAATTCCCACAGGAGGGGGAGCCATTTGGTTATGTGCAATATGTCAAGCTCGGTTAGAGTAACACGAAGCGCTGCtgctgaaagggttaaagtgtgCTGGACACAGTGAGACAGCAGCTAAATAGGAAGGAAAATCTGCAGATGAGATGTCAGATTCAAAGCACTCTATTAAGTGAAGGAGGTTAATAAAGGATGAGAGGATTTGActctgcagtttctgaggcCCTCAGGGTGATGTGGGTTCATACTGGACTCAGCAAAAATACCCTCCAAAAccacagagagatagacagctTCCAGAACAGGCAGAGGCTAAAAGAGATAGGTTAGGAGACATGAGTCGTGGAGGAAGACAGCAGATGACCCAGACGCTTAGAAAAAAGAAACGCGATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50116 True 486 lncRNA 0.47 1 17026457 17026942

Neighbor

gene id symbol gene type direction distance location
LOC103037732 NA coding downstream 132940 16875022 ~ 16893517 (-)
exoc6 exoc6,LOC107654070 coding downstream 160363 16798517 ~ 16866094 (-)
LOC103044660 LOC103044660,LOC108412396,LOC107653962,LOC108273895,LOC107745679,LOC107593523,LOC107596578 coding downstream 232950 16790627 ~ 16793507 (-)
jmjd1c jmjd1c,jmjd1cb,LOC108412835 coding downstream 312968 16538181 ~ 16713489 (-)
egr2 egr2,egr2b,LOC107596611,LOC107596614,LOC107653961,LOC107739063,LOC107745678 coding downstream 542312 16463328 ~ 16484145 (-)
LOC103032763 snu13,nh2l1,snu13b,LOC105898651,LOC105031476,LOC105910236 coding upstream 38461 17065403 ~ 17067982 (-)
trnal-uag_1 NA coding upstream 68303 17095245 ~ 17095326 (-)
LOC103043322 NA coding upstream 121599 17148541 ~ 17169878 (-)
LOC103029821 aco2,LOC108273913,LOC107692062,LOC107554054,LOC107731401 coding upstream 160725 17187667 ~ 17198837 (-)
LOC103028774 NA coding upstream 177390 17204332 ~ 17212783 (-)
G37189 NA non-coding downstream 5529 17020721 ~ 17020928 (-)
G37185 sun1 non-coding downstream 10559 17000372 ~ 17015898 (-)
G36922 reep3 non-coding downstream 274289 16742832 ~ 16752168 (-)
G36882 NA non-coding downstream 381892 16638592 ~ 16644565 (-)
G36845 NA non-coding downstream 537865 16487035 ~ 16488592 (-)
G37191 sun1 non-coding upstream 9614 17036556 ~ 17040941 (-)
G37206 NA non-coding upstream 64800 17091742 ~ 17092051 (-)
G37213 NA non-coding upstream 81770 17108712 ~ 17110709 (-)
G37215 NA non-coding upstream 85560 17112502 ~ 17116008 (-)
G37217 NA non-coding upstream 94833 17121775 ~ 17122201 (-)
G37183 NA other downstream 7539 17016128 ~ 17018918 (-)
LOC103043629 LOC108412394 other downstream 111172 16913570 ~ 16915285 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other downstream 1185941 15837105 ~ 15840516 (-)
G36677 NA other downstream 1251864 15747400 ~ 15774593 (-)
c4h10orf88 LOC103041415 other downstream 2229245 14785952 ~ 14797212 (-)
crym rac1,RAC1,rac1a,crym,LOC105898786,LOC108412270,LOC108437155,LOC107569188 other upstream 20665 17047607 ~ 17062947 (-)
LOC103030148 csdc2,LOC105919973,LOC102235694 other upstream 152405 17179347 ~ 17184427 (-)
LOC103024241 maff,LOC107690056,LOC107692071,LOC107554043,LOC107584105,LOC107734233 other upstream 347242 17374184 ~ 17381733 (-)
G37290 NA other upstream 406030 17432972 ~ 17466024 (-)
LOC103025140 NA other upstream 446968 17473910 ~ 17476878 (-)

Expression


Co-expression Network