LOC103035674 (LOC108411004)


Basic Information

Item Value
gene id LOC103035674
gene name LOC108411004
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 24773731 ~ 24786710 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235892.3
GTGATAAGCAGCTGCCTTATTCGGCCTGTGCTCATCTCAGACAGACTGTGGACGCACACCGGGTCGCATCCAGGCACTTCTGCACTCCAGCCTGCAACCACTTCTGCATCCCAAAACCAGAGGCTGACTGGACATGGAGATGGAGAAGGAGGTCCTGAAATATGAGGAGGGCTTTAACAGGGCTGCGGGGGCCATCAGCCGCTTCCCCTTAATTGAACTGAAAGGTGTTCCCCTCAGAAATTACATCGTTCAGAACTGGAGCTCCATCTCAGCCTTCGAACCCGACCCAACTGACCTGCTCATAGCCACCTACCCCAAAGCAGGAACAACTTGGGCCCAGGAGATTGTGGATCTGTTGCTGCATAATGGAGACTCAGAGGCCTGTAAGAGAGGTCCAACTGTTGACCGCTTCCCATTCCTGGAGATCCAGTACCCTCCACCTATTCCATCTGGGCTTGACCTTCTAAAGAAAATGAAACCCCCCAGGTTCATCAAGACACACCTGCCTATTCAGCTGGTTCCTGAGGGATTCTGGAAGCATAAATGCAAGGTGATTTACGTGGCTCGGAATGCTAAGGACAACCTGGTCAGCTACTACCATTTTCACCGTATGAATAAGGCTCAGCCAGATCCAGGAACCTGGGATGAATACATACAGAATTTCATGAGGGGAAAatTGGCCTGGGGTTCATGGTATGACCATGTGAAAGGATActggaaggaaagagagaagaagaacatTCTATATCTTTTCTATGAGGACATGAAAGAGAACCCTCGCCAGGCAGTAGAGCAGATTATGCGCTACCTGGATCTGTCAGTGAGTGAAGAGGTGATTGAAAAGATCGTGCAGCTGACGTCTTTCAACAGTATGAAGGACAATCCGATGGCCAACTACACTTTTATCCCAAAGATAATGTTTGACCACTCCGTCTCCGCCTTCATGAGAAAAGGGGAGGTTGGAGACTGGACCAACCATTTCACTCCAGCTCAATCCCAAGTGTTTGATGAGGACTATGTCAGACAAATGGCTGATGTGGACATGCCCTTTCGCACCAGCCTGTAACAATTTACTCCATAACAGACATCCCCAAAACACCTCTAAATCTGAGATCCAAGTGCATATGGACACCACTGAACAATAACTTGTGATGATTCGTGTCTGTTCTACTCATCGCTGTCCAGACAAATCAGTAGTAATGCTATGTTATTGAGCTATGTTAGAATTTATTTTAAGATCTTTATCCTTTAAAACAGCTTCTCAATCCTGGTTAGAGaagttgtttcttttttgttcagTGAACAaagtacactgctcaaaaaaataaagggaacacttaaACAACACAATGTAACTCCAAGTTAACcacacttctgtgaaattaaccTGTTcagttaggaagcaacactgattgacaatcaatttcacctgctgctGTGCAAGTAGAACAAACAACATGTAAACATGAGGGGCAATCAGCAAGACAACCCCTATAAAGTGGTTCTGGTATAGAGTGGTTGCTCAGAGACCACAGACCACAGACCTTTTCTCCGTTCTCATCCTTTCTGGCTGATGTTCTGGtcacttttgcattttgtcagttCTCTCACCATAGAGGTAGCATGAGGCAGAGTTTACAACCCACAGAAGTTGCTCAGGTAGTgtagctcatccaggatggcacatcaatgcaaGCTggggcaagaaggtttgctgtgtctgtcagcacagagtccagagcatggagcagataccaggagacagaccagtacaccaggagacatggAGGGGGCcataggagggcaacaacccagcagcaggaccgcaaCCTCCTCCTTTGTGCAAGGAGAAACAGTGCAAGAGCTCTGCAAAATGACCTTCAGCAGGCCACTAATATCCATGTTTCTGCTCAAATGAgggtggtatgagggcccgGCGTCCACAAGTAGGGCTTTTGCTTACAGCCCAATACCGTGCAGAACACAAAGACTGGCAGATTCGCCATTGGCGCCCTGTGCTCTTTACGGATgagagcaggttcacactgagcacatgtgaCAGAATCTGGAGATGCCATGATTTTGAGTATGATTCCAAATCCAGACCTCAATGGGATAATAATTTTGATTTAGATTGATAATTTGTACTTTATTTTGTTCTTAACACATTCcactatgtaataaataaagatttttgactgcaatattttatttattgagatcatggatgtgttattttagtgttgcctttatttttttgagcagtgtatgtATTTACGCAGTGCCAGCTTACGACTGTGGGCGGTTCCCCAAAACATCAGGAAAAAGAGGGTTACATCTTCTGAAAGGCTAAACTATCTCTTTAAATGAATTTAGGAAATAGGTTGATGATTCAGAAAATCAATGAATTCTGCTTTTTTCCCTTGATAGTGAataatatttgtaattaaataatataatttaatgtcttgccatttttaatgttattcatCAACTTGAAATTGAGACAATTTATGTCACAATGAGTCTATTAATTTCCAATAAATCTATTAGTTTCCTAACTGCAGTTCTTAAGAAGGTGTGAAATATACAATGTATTACCAAAAGTATTCACTTACTCATCTAAGtcattaaattaattgtgaGTTTGTTGCGTTGCTGGACCTGTCCGTGAATGAAGGGATGATTGAAAAGATTGTACAGCTGACGACCTTCAAAGTCATGAAGGACAATCTGATGGCCAACTACATTTTTGTCCAAAGATAATATTTGACCCCTCCCTCCATCTCCGCCTTCATGAGAAAAAGGTTTGTTTGCACTGTAGAAATGTTtctgcatctgtttttaaacaatgagCTTTAAACATGTAGCCTTTTTTTGCGACTCTTGTCTCAACAAGCAGGTGAGGAGGGAAGTGAAGTATACAAGACGTGGCAACCCAAGTCTAATTATTAGCCCTATCTGGTACAGAAAACTGCAGCTTTGCTCTCTGGTGTTGCTGCAGCCATCTAGTCCTACACAGCTTAACTGGCCTTGTGTTTTCACCCCCACCCCCATGACTCAACGAATAAAGAGGACAACGTGATAGCCTTTATCTTCCTAGCCCTGATAGAATTATATGATAGGGGAGTCCTTGCTTGTGGATAGGAATTTATAATGGTCAAATGa
>XM_022669380.1
GTGAGTTTCCGTGATAAGCAGCTGCCTTATTCGGCCTGTGCTCATCTCAGACAGACTGTGGACGCACACCGGGTCGCATCCAGGCACTTCTGCACTCCAGCCTGCAACCACTTCTGCATCCCAAAACCAGAGGCTGACTGGACATGGAGATGGAGAAGGAGGTCCTGAAATATGAGGAGGGCTTTAACAGGGCTGCGGGGGCCATCAGCCGCTTCCCCTTAATTGAACTGAAAGGTGTTCCCCTCAGAAATTACATCGTTCAGAACTGGAGCTCCATCTCAGCCTTCGAACCCGACCCAACTGACCTGCTCATAGCCACCTACCCCAAAGCAGGTGttttttttttcaactttcttTGCTGTATTTTAGGAACAACTTGGGCCCAGGAGATTGTGGATCTGTTGCTGCATAATGGAGACTCAGAGGCCTGTAAGAGAGGTCCAACTGTTGACCGCTTCCCATTCCTGGAGATCCAGTACCCTCCACCTATTCCATCTGGGCTTGACCTTCTAAAGAAAATGAAACCCCCCAGGTTCATCAAGACACACCTGCCTATTCAGCTGGTTCCTGAGGGATTCTGGAAGCATAAATGCAAGGTGATTTACGTGGCTCGGAATGCTAAGGACAACCTGGTCAGCTACTACCATTTTCACCGTATGAATAAGGCTCAGCCAGATCCAGGAACCTGGGATGAATACATACAGAATTTCATGAGGGGAAAatTGGCCTGGGGTTCATGGTATGACCATGTGAAAGGATActggaaggaaagagagaagaagaacatTCTATATCTTTTCTATGAGGACATGAAAGAGAACCCTCGCCAGGCAGTAGAGCAGATTATGCGCTACCTGGATCTGTCAGTGAGTGAAGAGGTGATTGAAAAGATCGTGCAGCTGACGTCTTTCAACAGTATGAAGGACAATCCGATGGCCAACTACACTTTTATCCCAAAGATAATGTTTGACCACTCCGTCTCCGCCTTCATGAGAAAAGGGGAGGTTGGAGACTGGACCAACCATTTCACTCCAGCTCAATCCCAAGTGTTTGATGAGGACTATGTCAGACAAATGGCTGATGTGGACATGCCCTTTCGCACCAGCCTGTAACAATTTACTCCATAACAGACATCCCCAAAACACCTCTAAATCTGAGATCCAAGTGCATATGGACACCACTGAACAATAACTTGTGATGATTCGTGTCTGTTCTACTCATCGCTGTCCAGACAAATCAGTAGTAATGCTATGTTATTGAGCTATGTTAGAATTTATTTTAAGATCTTTATCCTTTAAAACAGCTTCTCAATCCTGGTTAGAGaagttgtttcttttttgttcagTGAACAaagtacactgctcaaaaaaataaagggaacacttaaACAACACAATGTAACTCCAAGTTAACcacacttctgtgaaattaaccTGTTcagttaggaagcaacactgattgacaatcaatttcacctgctgctGTGCAAGTAGAACAAACAACATGTAAACATGAGGGGCAATCAGCAAGACAACCCCTATAAAGTGGTTCTGGTATAGAGTGGTTGCTCAGAGACCACAGACCACAGACCTTTTCTCCGTTCTCATCCTTTCTGGCTGATGTTCTGGtcacttttgcattttgtcagttCTCTCACCATAGAGGTAGCATGAGGCAGAGTTTACAACCCACAGAAGTTGCTCAGGTAGTgtagctcatccaggatggcacatcaatgcaaGCTggggcaagaaggtttgctgtgtctgtcagcacagagtccagagcatggagcagataccaggagacagaccagtacaccaggagacatggAGGGGGCcataggagggcaacaacccagcagcaggaccgcaaCCTCCTCCTTTGTGCAAGGAGAAACAGTGCAAGAGCTCTGCAAAATGACCTTCAGCAGGCCACTAATATCCATGTTTCTGCTCAAATGAgggtggtatgagggcccgGCGTCCACAAGTAGGGCTTTTGCTTACAGCCCAATACCGTGCAGAACACAAAGACTGGCAGATTCGCCATTGGCGCCCTGTGCTCTTTACGGATgagagcaggttcacactgagcacatgtgaCAGAATCTGGAGATGCCATGATTTTGAGTATGATTCCAAATCCAGACCTCAATGGGATAATAATTTTGATTTAGATTGATAATTTGTACTTTATTTTGTTCTTAACACATTCcactatgtaataaataaagatttttgactgcaatattttatttattgagatcatggatgtgttattttagtgttgcctttatttttttgagcagtgtatgtATTTACGCAGTGCCAGCTTACGACTGTGGGCGGTTCCCCAAAACATCAGGAAAAAGAGGGTTACATCTTCTGAAAGGCTAAACTATCTCTTTAAATGAATTTAGGAAATAGGTTGATGATTCAGAAAATCAATGAATTCTGCTTTTTTCCCTTGATAGTGAataatatttgtaattaaataatataatttaatgtcttgccatttttaatgttattcatCAACTTGAAATTGAGACAATTTATGTCACAATGAGTCTATTAATTTCCAATAAATCTATTAGTTTCCTAACTGCAGTTCTTAAGAAGGTGTGAAATATACAATGTATTACCAAAAGTATTCACTTACTCATCTAAGtcattaaattaattgtgaGTTTGTTGCGTTGCTGGACCTGTCCGTGAATGAAGGGATGATTGAAAAGATTGTACAGCTGACGACCTTCAAAGTCATGAAGGACAATCTGATGGCCAACTACATTTTTGTCCAAAGATAATATTTGACCCCTCCCTCCATCTCCGCCTTCATGAGAAAAAGGTTTGTTTGCACTGTAGAAATGTTtctgcatctgtttttaaacaatgagCTTTAAACATGTAGCCTTTTTTTGCGACTCTTGTCTCAACAAGCAGGTGAGGAGGGAAGTGAAGTATACAAGACGTGGCAACCCAAGTCTAATTATTAGCCCTATCTGGTACAGAAAACTGCAGCTTTGCTCTCTGGTGTTGCTGCAGCCATCTAGTCCTACACAGCTTAACTGGCCTTGTGTTTTCACCCCCACCCCCATGACTCAACGAATAAAGAGGACAACGTGATAGCCTTTATCTTCCTAGCCCTGATAGAATTATATGATAGGGGAGTCCTTGCTTGTGGATAGGAATTTATAATGGTCAAATGa

Function

GO:

id name namespace
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG:

id description
K01025 SULT1; sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235892.3 False 3168 mRNA 0.43 7 24773741 24786710
XM_022669380.1 True 3214 mRNA 0.43 7 24773731 24786710

Neighbor

gene id symbol gene type direction distance location
LOC103035168 sult1st6,LOC108274358,LOC108411008,LOC108274122,LOC108411004 coding upstream 7995 24751051 ~ 24765736 (+)
LOC103035992 NA coding upstream 29599 24730900 ~ 24744132 (+)
mto1 mto1 coding upstream 59918 24697136 ~ 24713813 (+)
LOC103037544 adprh,LOC108274007,LOC108411014,LOC105894051,LOC106579059 coding upstream 110151 24652629 ~ 24663580 (+)
LOC111192396 LOC108411010 coding upstream 125121 24631703 ~ 24648610 (+)
pelo pelo,LOC107653258 coding downstream 61426 24848136 ~ 24865954 (+)
pkmyt1 pkmyt1 coding downstream 208776 24995486 ~ 25008027 (+)
LOC103031867 NA coding downstream 229626 25016336 ~ 25020657 (+)
LOC103032189 rpl19,LOC103032189,LOC107084780,LOC107567432,LOC102219718,LOC107670912,LOC107378566,LOC107754295 coding downstream 235481 25022191 ~ 25025894 (+)
LOC103022724 NA coding downstream 507543 25294253 ~ 25333929 (+)
G38903 NA non-coding upstream 17151 24752755 ~ 24756580 (+)
G38833 NA non-coding upstream 258740 24458281 ~ 24514991 (+)
G38851 NA non-coding upstream 263507 24504831 ~ 24510224 (+)
G38837 LOC108443171 non-coding upstream 298303 24466389 ~ 24475428 (+)
G38822 NA non-coding upstream 329325 24443634 ~ 24444406 (+)
G38910 atp2a1,LOC108411009,LOC107716472,LOC107551849,LOC108247894,LOC108274121,LOC105891595,LOC107653256 non-coding downstream 1035 24787745 ~ 24795792 (+)
G38909 NA non-coding downstream 19348 24806058 ~ 24807357 (+)
G38905 LOC108413689,LOC108274218,LOC101064018,LOC103392690 non-coding downstream 48842 24835552 ~ 24839365 (+)
G38945 patl2,tceb2,elob,LOC100708306,LOC102795145 non-coding downstream 159270 24945980 ~ 24992978 (+)
G38946 NA non-coding downstream 162075 24948785 ~ 24952976 (+)
G38870 NA other upstream 156279 24616784 ~ 24617452 (+)
G38817 NA other upstream 799211 23974161 ~ 23974520 (+)
trnar-ccu_27 NA other upstream 1023538 23750121 ~ 23750193 (+)
trnar-ccu_26 NA other upstream 1023640 23750019 ~ 23750091 (+)
trnar-ccu_25 NA other upstream 1023742 23749917 ~ 23749989 (+)
G39179 NA other downstream 588249 25374959 ~ 25375344 (+)

Expression


Co-expression Network