ten1



Basic Information


Item Value
gene id ten1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 25205651 ~ 25209311 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>XM_007252138.3
CCTGACGCAGGAGCGCGTTCAAACACTCAACAGTAGTAGTGGGTTTAGCAGCGGcacagttagcttagcttagttgtTAGGTTTGTGTTGTATCTTGGTGTATTTCGCTGTATTGTTAAGGGTTCATTCTCAGGACATATTCTGAGTACACAGCGCTGATTTATGCTGATGTTTCCTATTCACAATTCCTAGTGTAAAAGCGCTCAGGTTCTCTGGTTAAGAAGTTTGTTCAGTAGTTATATGGTTAGAAATGCTTCCCTCGCCTGCAGTGTTTCAGTTTCCCTGGGAAATTAACGCTGATCAGGTGAAAGATGGAGCCTCCATGCGGACATTTGGCAGACTTACAAGTTATTTTCCGGCGGAATCCAGAGCTGTTCTTACTTCCCAACACATGTCTGTGCAGCACCAGGTGTTAGTACACACAGTGTTTGTCGAGCCCTTTAATCCAATAATTGGGGCGCAATATATCGCACTTGGAGAAATTGACAAAGCAGAGGGGTGTGATGAAGCTACTTTACGTGCTCGGGTCCTGAATTGCGTGGATGGAGTTAATGTTGCGCTGCTGCAGAAAGCTATAAATGAACAGAGGAACTTTTTCAAGGAGCGGAACAACAAGGCTGGTTCACAGTAGCAACAGTTTTGTTTGATGCTGTGAAAAACACAGAAGCTTAAAGGCTCCCCAGTGATTCCACAGCCATCAGTGATCAAGAGCAGGAGGCTCAGGTGAACTTATTTCCTCTAAGTTCGAAGAATGGTCCACCACTTCACCCCTTATCACTCAATGCAATTCTGGTCAGCACAGGTTTCTGTTTGTGTTCTCCTTCAAGCGTGTTGAGCTGTGTAGTGACCCTGTGTTTGTGGctgattaaaagaaaaatgcagtCACTATTAAGTGGCTGACGGAACAAACTCCCAGCACTGGTGTCGACGTGAAATGGGAATCCTgttttttaagagagaaatGAATCAAGATGAAAGGATCCAGTTTAATAAtgtatggacatgacctcataATTTGATTCTAAAGTCAGTATTGCTTGTTATATTTTTCTTAGCAAGAAAAGCCCATTTGCATGACCAAGACAGTATGGTGACTCtttaaaaacagtgaatttattttatttatatttaataatttagtatatttataaaaatgtatactcCCAATTCCAATATCTGAATAATTTAAAAGGTCATTGTTCTTTAAAAGGGTGTGATTGCATTGTTATGCCTTTATATTGTCATTATATTAGTAcaataaaatggtcttaaaatga

Function


NR:

description
PREDICTED: CST complex subunit TEN1

GO: NA

KEGG:

id description
K23313 TEN1; CST complex subunit TEN1

RNA


RNA id representative length rna type GC content exon number start site end site
XM_007252138.3 True 1277 mRNA 0.40 3 25205651 25209311

Neighbor


gene id symbol gene type direction distance location
cep95 NA coding downstream 89955 25096237 ~ 25115696 (-)
trnar-ccg_1 NA coding downstream 203895 25001684 ~ 25001756 (-)
c13h17orf58 cunh17orf58,LOC102781445,LOC105900187 coding downstream 205758 24985711 ~ 24999893 (-)
nol11 NA coding downstream 311433 24882893 ~ 24894218 (-)
LOC103034389 NA coding downstream 746481 24422157 ~ 24459170 (-)
aanat aanat coding upstream 112585 25321896 ~ 25329028 (-)
sphk1 NA coding upstream 195683 25404994 ~ 25446902 (-)
cygb cygb,cygb2,LOC107698994 coding upstream 280298 25489609 ~ 25513487 (-)
LOC103025798 LOC108424712,LOC103354899,LOC108435855 coding upstream 369387 25578698 ~ 25580926 (-)
LOC103035347 si:ch211-59d13.2,slc12a5,LOC107744354,LOC107740262 coding upstream 501920 25711231 ~ 26019447 (-)
G113631 NA non-coding downstream 5533 25199179 ~ 25200118 (-)
G113547 NA non-coding downstream 220017 24983688 ~ 24985634 (-)
G113544 NA non-coding downstream 223906 24981423 ~ 24981745 (-)
G113542 bptf non-coding downstream 231103 24969227 ~ 24974548 (-)
G113535 bptf,LOC102781734 non-coding downstream 264761 24936756 ~ 24940890 (-)
G113649 NA non-coding upstream 7504 25216815 ~ 25219755 (-)
G113652 NA non-coding upstream 21505 25230816 ~ 25285543 (-)
G113668 rhbdf2 non-coding upstream 109238 25318549 ~ 25321857 (-)
G113744 NA non-coding upstream 209313 25418624 ~ 25510087 (-)
G113753 NA non-coding upstream 261161 25470472 ~ 25473655 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 1188850 24004549 ~ 24016801 (-)
G113304 NA other downstream 1304153 23901123 ~ 23901498 (-)
G113276 NA other downstream 1412190 23735954 ~ 23793461 (-)
LOC103040267 LOC108433657 other downstream 1641844 23559101 ~ 23563807 (-)
G113190 NA other downstream 1652587 23552349 ~ 23553064 (-)
ctsa NA other upstream 425993 25635304 ~ 25686577 (-)
G113826 NA other upstream 823584 26032895 ~ 26062284 (-)
G113888 NA other upstream 1136829 26346140 ~ 26393197 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 2915925 28125236 ~ 28129856 (-)
G114270 NA other upstream 3138954 28348265 ~ 28361481 (-)

Expression



Co-expression Network