G113753


Basic Information

Item Value
gene id G113753
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 25470472 ~ 25473655 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU153703
GTTAATGACCTGTATTGAATTACCCCACACAGGGCATGTTGATTACCTGAGCAACAAGTGTCTTTCTGACCTCCAGTTTCACCCAGGCTCGCTGCTTCCAGGCAAGCCTTTGACTTTAGTCTGCGTAAGAGCTGGACTGGGAGAGATTTAAGGGGGAAATGGCTTCAAAAGAAGCTCGTacgctagctaacgttagcctcCCAGCCCACTGGAGGGATGTCAGAGAGTGGAGTATGGAGAAAAGACAGAGCTACGAAATGTGGGTGCTAGATGTAGAGAGTGTCCTTAACTCGATGGCTAGACAGCTGAGTCTTTCTCTGGAGAAATATCCGAGAGAGAAGCACAATGATGGCTTTTCATCCTCTTCAACCAAACGGAGGCTGCCTTTCCATTACCCAGCTCTTACACTGTGATCAGCCATAATCCTGTACCAGTAGATCACCTGGTTTGACTCACCGCATAACCTCCTGAGAACCATGAATTGATCCACGTCTACAACCAGACTCCCAGTTAAAAGTCCTGGACTATGTTCCCAAAAATCTTGGTCATGTGACTGCCCTAGAAAAGTCCTAAATGAGTTCACAGTGCAGTATGATAGCTTTGTCACTAAATGCATTATTGTGGCATCTTGTTGTGTCTGCTTTCTCCTCTCTGCTGAAAATAAAGTTTTGTC

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU153703 True 673 lncRNA 0.46 3 25470472 25473655

Neighbor

gene id symbol gene type direction distance location
sphk1 NA coding downstream 23570 25404994 ~ 25446902 (-)
aanat aanat coding downstream 141444 25321896 ~ 25329028 (-)
ten1 NA coding downstream 261161 25205651 ~ 25209311 (-)
cep95 NA coding downstream 354776 25096237 ~ 25115696 (-)
trnar-ccg_1 NA coding downstream 468716 25001684 ~ 25001756 (-)
cygb cygb,cygb2,LOC107698994 coding upstream 15954 25489609 ~ 25513487 (-)
LOC103025798 LOC108424712,LOC103354899,LOC108435855 coding upstream 105043 25578698 ~ 25580926 (-)
LOC103035347 si:ch211-59d13.2,slc12a5,LOC107744354,LOC107740262 coding upstream 237576 25711231 ~ 26019447 (-)
LOC103030576 LOC108431845,LOC107696435,LOC108271496,LOC107560513,LOC107666154,LOC100690876 coding upstream 617996 26091651 ~ 26101521 (-)
eya2 eya2,LOC107666141,LOC106565282 coding upstream 678792 26152447 ~ 26206570 (-)
G113668 rhbdf2 non-coding downstream 148615 25318549 ~ 25321857 (-)
G113652 NA non-coding downstream 184929 25230816 ~ 25285543 (-)
G113649 NA non-coding downstream 250717 25216815 ~ 25219755 (-)
G113631 NA non-coding downstream 270354 25199179 ~ 25200118 (-)
G113547 NA non-coding downstream 484838 24983688 ~ 24985634 (-)
G113756 NA non-coding upstream 56003 25529658 ~ 25529931 (-)
G113767 NA non-coding upstream 87640 25561295 ~ 25563405 (-)
LOC111193751 NA non-coding upstream 94433 25568088 ~ 25574469 (-)
G113771 NA non-coding upstream 108968 25582623 ~ 25582977 (-)
G113818 NA non-coding upstream 531867 26005522 ~ 26007995 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 1453671 24004549 ~ 24016801 (-)
G113304 NA other downstream 1568974 23901123 ~ 23901498 (-)
G113276 NA other downstream 1677011 23735954 ~ 23793461 (-)
LOC103040267 LOC108433657 other downstream 1906665 23559101 ~ 23563807 (-)
G113190 NA other downstream 1917408 23552349 ~ 23553064 (-)
ctsa NA other upstream 161649 25635304 ~ 25686577 (-)
G113826 NA other upstream 559240 26032895 ~ 26062284 (-)
G113888 NA other upstream 872485 26346140 ~ 26393197 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 2651581 28125236 ~ 28129856 (-)
G114270 NA other upstream 2874610 28348265 ~ 28361481 (-)

Expression


Co-expression Network