G113767


Basic Information

Item Value
gene id G113767
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 25561295 ~ 25563405 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU153721
tGCATTCACACTGCTCCGCAATATCTACTGTTTCCACTACTAAAACAGTTTCATAGTGCACAGTCAGTGTTCTGGCCTAAAGTGGGAATGACAGAGACGCCATGGTTCTCAAGCTGcaacactatatggacaaaagtattgggatataacagtacatacagtacattttgtGCTAGATTTTTACAGAACAGCTTACAATACAATATCTTACTTCCAATAGCTTAGGTAAATCTCTGGGCGCCGCCATCTTAATTTAAGTCATAATAAGTCAACAGTCGAGCACAAATGTATAGGTAGAATAGTTGAgcagattgcaaaatgaatgcatgaattccagctgttgctgaaaatatctggttAATGTCGATATTATAATGGGAAAAACCAACAACAAATTTCATAAATATTGCTCAAAAAAGTTTTACTATTTTTGCTTAAATGTAAGATGGTTGCGCCCGGAGATTTACCTATGCTACGTGATGTAAACAttgacttttaataaacttcttgcgcagttttaaagttttaaatgtcagggtccTCTGGATTCTGCTATTGCAGTGTGGAGATACTTTAAGTCTGGATAatagtggaaaaagtgatttatcagcaGGCAGAAGgcatgccccatatcatccattgtaaaagcctgtttgggcaaagtgcactAAACATTGGAtatcagaaagctgcaggagagcagcGGTGGGCTGtttaacaaaggtaagtacttttaatcacattttaatacacCCATGTATTTTAATACACCCAAGTCTATTTCACACTAGAGTTCTTCTTTGACTCTGCAGCTTTACGCTATTTATTTGATAGTGCCATCACAATATACACCTTAAGGCAACTTTATATGGCCTTCAGGCCATGCCTGGTACTGGACATGGTGATCAGGATTCATAAGAAGGAGTTTCTACATACATTttgacatattttatattttaaacatgtcaGTAAAACTGACACGCTATTTTCTTTAAGTTACTAAGCATTAACAGAGTACAGAGTACAGATTACAGTCTTATGTGGTCTTCACATGGGTGAAATATAGGCTACGTGGCTTGTAATGTTAGGGCATATTTGAAGTTATTTACACATGCCCTGTACAATGTCCTGTATTTTAACTATATAATGTAACTGTACATGAACTGAACACATGATATAAGGCCTGGTGTCCCCGGACTATAGGCACAACACATAGACTAAAAAGAGCTGAGTGTGAGTTAAATATGAAAGCCCCTAAAAAGCACAGCACAGATCAGCATGCAGGGCACTGCAGATCATTCGCAAAACAGCTGACAAAAACAACAGCGGAGCAGAGAGAAGGTGAGAGCGGCTGCCGTACTTGGAAGCTCGATGCCAGGAAATGGAGCTTGGTGTTTCCCTGTATCGCCAAAAATAAAGGACTGGTTAAAAAGCacataaacacagcaaacatatTCAGTCAGTGCACTGCTCTCTCAGACTGACCAATTGTGAAAGAACACTCACATTTACATCAGAGGACCAATTTATGCTCCACCCACAAAGCCATTCATTTTATAGCTAGATTTGTGAAACTTTATAGAAAATTGGGTTACAATAACTTTTGTAATGAATACAAATAGGCTTTGATAGATTTTGTTTTGGTAAGTATTTGGTTCAGTTGTGCAACGGAGCCATCAGAATCATGCAAATTCATTTCTGTTGATATTTTCTAAAACAATCCTTCATTGATAAGTTTAGTGCttatttcataatttaaatgaaaaatatttaaatgcaaatgactTAATGAAACTGTGATCTGATATCTGTCATTCCCTacaaattgtacttttattgtCACTGAAAGAAACACACACCAGAAGGATCTCTTGAATATACATATGTTtgttaatacaaaaatacaaactaCATGTGCATTAGTCCGAATTACACGGTTATAAGTGAagtttctgtaaagaaaaatgtaGCACTAAAATTCCCAAAAATAGGTGGAAATGGAATTCAGCGTGATCCTAA

Function

NR:

description
PREDICTED: tight junction protein ZO-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153721 True 2019 lncRNA 0.37 2 25561295 25563405

Neighbor

gene id symbol gene type direction distance location
cygb cygb,cygb2,LOC107698994 coding downstream 47808 25489609 ~ 25513487 (-)
sphk1 NA coding downstream 114393 25404994 ~ 25446902 (-)
aanat aanat coding downstream 232267 25321896 ~ 25329028 (-)
ten1 NA coding downstream 351984 25205651 ~ 25209311 (-)
cep95 NA coding downstream 445599 25096237 ~ 25115696 (-)
LOC103025798 LOC108424712,LOC103354899,LOC108435855 coding upstream 15293 25578698 ~ 25580926 (-)
LOC103035347 si:ch211-59d13.2,slc12a5,LOC107744354,LOC107740262 coding upstream 147826 25711231 ~ 26019447 (-)
LOC103030576 LOC108431845,LOC107696435,LOC108271496,LOC107560513,LOC107666154,LOC100690876 coding upstream 528246 26091651 ~ 26101521 (-)
eya2 eya2,LOC107666141,LOC106565282 coding upstream 589042 26152447 ~ 26206570 (-)
gcnt7 NA coding upstream 729010 26292415 ~ 26302395 (-)
G113756 NA non-coding downstream 31364 25529658 ~ 25529931 (-)
G113744 NA non-coding downstream 51208 25418624 ~ 25510087 (-)
G113753 NA non-coding downstream 87640 25470472 ~ 25473655 (-)
G113668 rhbdf2 non-coding downstream 239438 25318549 ~ 25321857 (-)
G113652 NA non-coding downstream 275752 25230816 ~ 25285543 (-)
LOC111193751 NA non-coding upstream 4683 25568088 ~ 25574469 (-)
G113771 NA non-coding upstream 19218 25582623 ~ 25582977 (-)
G113818 NA non-coding upstream 442117 26005522 ~ 26007995 (-)
LOC111193689 NA non-coding upstream 512634 26076039 ~ 26076705 (-)
G113865 NA non-coding upstream 699457 26262862 ~ 26263175 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 1544494 24004549 ~ 24016801 (-)
G113304 NA other downstream 1659797 23901123 ~ 23901498 (-)
G113276 NA other downstream 1767834 23735954 ~ 23793461 (-)
LOC103040267 LOC108433657 other downstream 1997488 23559101 ~ 23563807 (-)
G113190 NA other downstream 2008231 23552349 ~ 23553064 (-)
ctsa NA other upstream 71899 25635304 ~ 25686577 (-)
G113826 NA other upstream 469490 26032895 ~ 26062284 (-)
G113888 NA other upstream 782735 26346140 ~ 26393197 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 2561831 28125236 ~ 28129856 (-)
G114270 NA other upstream 2784860 28348265 ~ 28361481 (-)

Expression


Co-expression Network