G113652


Basic Information

Item Value
gene id G113652
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 25230816 ~ 25285543 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU153561
ttttttttttttaatttATATTCATGATATTTGTGATGCTACCATCAACAAAGTGAGGGCCTCACATCGACTCCTGAGCCCGAGTGATATTACATGATATTACTATAATCATATGTCAAAACCAGTTGTTCATCTGTTAATCTTTCAGAATACATATTGGCAGTAGGAAATCAAAAAGAGATAGACAATCATAGCTAAAAACCTTACAAAACATCTCATAGCAAAGCTCTCTTCAGTTTACTATCAGGTCCCATTCTAACCCCAAGACCCTTTAGTTCAACCATATCCATCAATCAACTGATCACACTCATCTGGTCTGTGATCTGGTTCCCTTATCTATATTAACTGTTTaatcaaaatttaaaaagaCATTAGACTGATCCTAGATCAGCTCTACGATTAATTAAGGCCCTGGATAATCCAGCAGATCAGTTTGGAAATTCTGATTGATGAGATCCGATTGAAGGATTGTTCTCTGGCTATGAGTTAGTGCCATTAGTGCTTTCGGATGGACATGGAGCTGGTGGCTCCGCTGCTCACAGTTTGGACTGGAGGGGTTTCATGTACTTGTAGTAAGCGTCA

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU153561 True 582 lncRNA 0.38 2 25230816 25285543

Neighbor

gene id symbol gene type direction distance location
ten1 NA coding downstream 21505 25205651 ~ 25209311 (-)
cep95 NA coding downstream 115120 25096237 ~ 25115696 (-)
trnar-ccg_1 NA coding downstream 229060 25001684 ~ 25001756 (-)
c13h17orf58 cunh17orf58,LOC102781445,LOC105900187 coding downstream 230923 24985711 ~ 24999893 (-)
nol11 NA coding downstream 336598 24882893 ~ 24894218 (-)
aanat aanat coding upstream 36353 25321896 ~ 25329028 (-)
sphk1 NA coding upstream 119451 25404994 ~ 25446902 (-)
cygb cygb,cygb2,LOC107698994 coding upstream 204066 25489609 ~ 25513487 (-)
LOC103025798 LOC108424712,LOC103354899,LOC108435855 coding upstream 293155 25578698 ~ 25580926 (-)
LOC103035347 si:ch211-59d13.2,slc12a5,LOC107744354,LOC107740262 coding upstream 425688 25711231 ~ 26019447 (-)
G113649 NA non-coding downstream 11061 25216815 ~ 25219755 (-)
G113631 NA non-coding downstream 30698 25199179 ~ 25200118 (-)
G113547 NA non-coding downstream 245182 24983688 ~ 24985634 (-)
G113544 NA non-coding downstream 249071 24981423 ~ 24981745 (-)
G113542 bptf non-coding downstream 256268 24969227 ~ 24974548 (-)
G113668 rhbdf2 non-coding upstream 33006 25318549 ~ 25321857 (-)
G113744 NA non-coding upstream 133081 25418624 ~ 25510087 (-)
G113753 NA non-coding upstream 184929 25470472 ~ 25473655 (-)
G113756 NA non-coding upstream 244115 25529658 ~ 25529931 (-)
G113767 NA non-coding upstream 275752 25561295 ~ 25563405 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 1214015 24004549 ~ 24016801 (-)
G113304 NA other downstream 1329318 23901123 ~ 23901498 (-)
G113276 NA other downstream 1437355 23735954 ~ 23793461 (-)
LOC103040267 LOC108433657 other downstream 1667009 23559101 ~ 23563807 (-)
G113190 NA other downstream 1677752 23552349 ~ 23553064 (-)
ctsa NA other upstream 349761 25635304 ~ 25686577 (-)
G113826 NA other upstream 747352 26032895 ~ 26062284 (-)
G113888 NA other upstream 1060597 26346140 ~ 26393197 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 2839693 28125236 ~ 28129856 (-)
G114270 NA other upstream 3062722 28348265 ~ 28361481 (-)

Expression


Co-expression Network