CI01000010_08341936_08349855


Basic Information

Item Value
gene id CI01000010_08341936_08349855
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 8341359 ~ 8349880 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_08341936_08349855.mRNA
ACTTTGAGGGAAATGAGAAAGAGACATGCACAGGAGCGAGAATAGAGGAAGCAGGGAGTTTCAACCTGAGGACACCTTAATAGAGGATTCTGGTGAGTTTACATCTTGCTTGGCCCAGGCGAACCTCGGTGGGCAGAAAAAGGACCCCTCGGTAGGCTGTGCTGTGGATGTTCCAGGTCTGTCTTATCGGAATGAAGATATAATGGCAGAGAGTTGGAGGCAACACAGGAAACATGTGTTTGTGTTGAGTGAGGCAGGTAAACCTATCTACTCGCGCTATGGCAATGAGGAGGCCCTCTCTTCCACCATGGGGGTTATGATGGCGCTGGTCTCCTTCGTCCAGGCTGGAGGAAACACAATTCAATCTATTTTTTCAGATGAACGCACAGTGGTATTTTTGCAGAAGGGGCCGCTGGTGTTTGTATCCGTTTCTGCCACTCGCCAGTCTGAGCAGCAGCTCCGCAGCGAGCTCCTCCATGTTTATCATCAGATAGTCAGCATGCTCACGCAGGCCAGCATAAATCGCATCTTTGAGCACCGGAAGAACTATGACCTACGGCGTCTGCTGTTTGGCTCGGAGAAGGTTCTGGACAGCCTTCTCGATGTCATGGATTCTGATCCCAGCTTCATGCTGTCGGCAGTCCAGTGCCTGCCTCTGCCATCCTCTTCCAGAGACGTTCTCAGTCACATCCTACAGAAAGCCGTCACCCCAAATCTGGTCTTCTCCTTTCTCATTGCCAATAACCGACTTGTCTCCATCGTTCAGGAGAAGACGGTCCTGGAGGATGCTAGACTAAAACCCAGTGACCTTCATCTCCTCTTCAACCTCATCAGGGCCATTGCTTTTCAGGCTGGAGAGATATGGACGCCCATCTGCCTGCCTCTGTTCAATCATGACTGCTACTTTTATGCTTATGTGGCATATCTAGACCCTCCAGAATGTACTGTATGCCTTGTTCTTCTGTCTACAGATAAAGAAGCTTTTTATGCTGTGGCAGAATGCAAAAGGAAAATTGAAGAAGCTTTCACATCCCAGAATGCCTTGCAGTGTGTGGCAAACACTCAGATGAGCTGTTTTGATGATATCGGTGTAGCTAATCTCAGGCACTTCCTGTACAAACCCTCAAGTGTGCTAGAACACCATCGCCAACTGCCACAGTTCACATGCCCAGAGATGGATGTGACATACAGAACCCAGGATGAGAGGATACGTTTGCTAGATCTGTATCGCCACATGCACAATCGTATCCACAGTACGTCACGGCCTCTTAAACTCATCTACCATTCTGCAGACAGAGAAACTCTGCTGGCGTGGGTCACTAGCAAGTTTGAGATGTACGCCTGCTTTACTCCGCTTGTCACTAAGAAATCAGCTATCAGTGAACTCACTAAACTGCTGCGATGGATCAAAAAGGAAGAGGACCGTCTCTTTATCTGTCATCTCCCAAAATACTCCACTACCCCACAGCCAGGCAGGAGTTCCTCAGACAAGCCGAATACATCAGACACTGGCCTTCTGTCTCTCTTGTAGTCTTGTGTAACCTGTTTTACTTCTATGTTTCATAGTAAATTCAGTGGGTTTGTTTTGAATAGGAGATGTGGCTGCATGCATTAAATACATGTCTTCCTTGTTTGTGGGTTTGTAGGTGGTGTGCTTCCTTAATGAAGTTTTGAAATTCATGTTAATTTCTCAGTTAAACTTTTGATTTGTATTCATTTTATGCAAGCTCCTTTGTAATGACAGACTGTTGTATTAAATTAGTACTAAAAAGTGTATATATATATATATATATATATATATACACACTCCTCAATGCACTGTATGTAATAATAAATGTTTTTTGAGCAGTAAATAAGCATGTTACAATGATTTTTGAAGGATCATGTGACATTGAAAACTGTAAAAAGGACTGCTAAAAATTCAGCTTTGTCATCAGGACTAAATTACACTTTAAAATAGAAAACACTTTTAATAACTTAAATATTTCAATATTTCAATATTTTACTACTCTGTATTACATTGTTTTGCTAAGAAAACAACCGTGAAACTGTGGCCCACTTTAATAACAATGAATCATGAATATCTGGGAGTCTATTTAAATAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_08341936_08349855.mRNA True 2108 mRNA 0.43 4 8341359 8349880

Neighbor

gene id symbol gene type direction distance location
CI01000010_08293951_08338893 GRIPAP1 coding downstream 2466 8293670 ~ 8338893 (-)
CI01000010_08187103_08253432 KCND1 coding downstream 87406 8187061 ~ 8253953 (-)
CI01000010_08159110_08177308 NA coding downstream 164051 8159100 ~ 8177308 (-)
CI01000010_08093640_08128035 NA coding downstream 212712 8093410 ~ 8128647 (-)
CI01000010_08015262_08018732 PIM1 coding downstream 322572 8013962 ~ 8018787 (-)
CI01000010_08381760_08382057 NA coding upstream 31573 8381453 ~ 8382323 (-)
CI01000010_08586563_08587030 NA coding upstream 236577 8586457 ~ 8587030 (-)
CI01000010_08624504_08629844 PNCK coding upstream 274462 8624342 ~ 8629844 (-)
CI01000010_08694007_08717153 BCAP31 coding upstream 344111 8693991 ~ 8717153 (-)
CI01000010_08725595_08733769 SLC35A2 coding upstream 375087 8724967 ~ 8733769 (-)
G66915 NA non-coding downstream 50433 8288166 ~ 8290926 (-)
G66955 NA non-coding downstream 62686 8278470 ~ 8278673 (-)
G65588 NA non-coding downstream 208286 8132841 ~ 8133073 (-)
G65570 NA non-coding downstream 261781 8079248 ~ 8079578 (-)
G65562 NA non-coding downstream 275005 8065933 ~ 8066354 (-)
G66968 NA non-coding upstream 14586 8364466 ~ 8365209 (-)
G66980 NA non-coding upstream 39312 8389192 ~ 8389482 (-)
G66984 NA non-coding upstream 48639 8398519 ~ 8398740 (-)
G66992 NA non-coding upstream 54660 8404540 ~ 8406745 (-)
G67113 NA non-coding upstream 284138 8634018 ~ 8729421 (-)
CI01000010_07880416_07900104 NA other downstream 443241 7880375 ~ 7900104 (-)
G65453 NA other downstream 669016 7659435 ~ 7672343 (-)
G64918 NA other downstream 2244879 6093689 ~ 6096480 (-)
G64877 NA other downstream 2424348 5916257 ~ 5917011 (-)
G64564 NA other downstream 3098433 5049155 ~ 5242926 (-)
G67099 NA other upstream 291810 8641690 ~ 8674897 (-)
CI01000010_11929215_11933223 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 3579081 11928448 ~ 11933343 (-)
CI01000010_11965317_11969111 NA other upstream 3614985 11964865 ~ 11969710 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location