G66992


Basic Information

Item Value
gene id G66992
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 8404540 ~ 8406745 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU76328
GATGCAGAGCCGCTTGTTGACATCACAAGGCCGGAGTACGCAGGACAGTAACCTTGCTCTGAGGCGAGCGAATCACAGTGCAAATTTACAGTTCAGATTTATCCTCAGATGCTCAGTCGGTGGTAATCAAACAGACAACTAAATAGCATGTGCTCTGATGAAAGGGGGCAGAGGGCGACGGCGGCTGTGTTGATATAGAGATGATCACAGCCTGCACAAGGTCAGCAGAACTGTGCTTCAATTGACGAGGACGGGTTATTCATAAACCAGCACTGATCTCATCAACGCAACATCATCTAATAATGCAGCAAGAAAAAAAGACTCATTTTCTTCAGATGGACTAGCGTAGTACTTTAGGCTGCTTAAACACATTCAGCGGGCTCGTTTTGAATTCAATGGGTGTTCGTTTCAGTGCTGGGGGTGAAACATGTGGCCTATAATTCATCTACACATGTACGTGACCAGAAACACCAGATCATCCATCATTTTCCCAAAGCATATATTGCGAAATAGAGATCGGAGATACGAGATTGTTTTCGGCGATGTGTAAAAACAGCGTTTTTCTCGGGTTCCTCCTCCACAGCACCTAACATTCTCCAGCGGAGCTCATACTAATCTCACGCCGGGTGTGAGCATCCCTGATCCGGCTACTGCAGGCAGCCACAGCCCCTCTCCTCTCCACCGAGACGCGGATCAAACTGGCACCAAAGGCTTTGAATGATCAGATTTGGTTCAAACCCATCAATTGCATCTTACTGAGAGTATCTCAATGCATCAGTTACCCATGCAAGGAAATGAACGAAATCAATGTGCAAATTAAGCAATACATTTGATTTTAGTTTAGGCTTCAATAGGAGGAACAACATTTGGGTCATTTGCCTAGAGGAAAACAATATTTCAGTCATGTGACTGTTACAGATGTGACAGACAAACAGATTGAGTGCACGATATCACCTTTTTCCAAACATCTATTCAATCTGCCTGCCTTGATGAACTAATACAATGCTATTTTCACTAATTGTAAGCCCTGATTGTGGTGCGTACTACTGTTTATCTAAAGCAACTTTCCATTTAAAAATGTCAATATGCATGTGTTAGATCCATGCACAACCACCAACAGGCAAGACTGGAATAATTATACATTGTGTATCGGCTACTAGAAACAGTCTAAGTCATTTTAATGCATTTCTTAATGCACAGCACAAATGCACGGATATTTTACCTCGTTTTAGCTAAACACTGGTTTTAATGCCCC

Function

NR:

description
PREDICTED: plakophilin-4-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76328 True 1255 lncRNA 0.43 2 8404540 8406745

Neighbor

gene id symbol gene type direction distance location
CI01000010_08381760_08382057 NA coding downstream 22217 8381453 ~ 8382323 (-)
CI01000010_08341936_08349855 NA coding downstream 54660 8341359 ~ 8349880 (-)
CI01000010_08293951_08338893 GRIPAP1 coding downstream 65647 8293670 ~ 8338893 (-)
CI01000010_08187103_08253432 KCND1 coding downstream 150587 8187061 ~ 8253953 (-)
CI01000010_08159110_08177308 NA coding downstream 227232 8159100 ~ 8177308 (-)
CI01000010_08586563_08587030 NA coding upstream 179712 8586457 ~ 8587030 (-)
CI01000010_08624504_08629844 PNCK coding upstream 217597 8624342 ~ 8629844 (-)
CI01000010_08694007_08717153 BCAP31 coding upstream 287246 8693991 ~ 8717153 (-)
CI01000010_08725595_08733769 SLC35A2 coding upstream 318222 8724967 ~ 8733769 (-)
CI01000010_08740418_08742300 PIM2 coding upstream 332641 8739386 ~ 8742300 (-)
G66984 NA non-coding downstream 5800 8398519 ~ 8398740 (-)
G66980 NA non-coding downstream 15058 8389192 ~ 8389482 (-)
G66968 NA non-coding downstream 39331 8364466 ~ 8365209 (-)
G66915 NA non-coding downstream 113614 8288166 ~ 8290926 (-)
G66955 NA non-coding downstream 125867 8278470 ~ 8278673 (-)
G67113 NA non-coding upstream 227273 8634018 ~ 8729421 (-)
G67156 NA non-coding upstream 535847 8942592 ~ 8942826 (-)
G67262 NA non-coding upstream 681140 9087885 ~ 9088109 (-)
G67265 NA non-coding upstream 682830 9089575 ~ 9089829 (-)
G67213 NA non-coding upstream 744776 9151521 ~ 9153635 (-)
CI01000010_07880416_07900104 NA other downstream 506422 7880375 ~ 7900104 (-)
G65453 NA other downstream 732197 7659435 ~ 7672343 (-)
G64918 NA other downstream 2308060 6093689 ~ 6096480 (-)
G64877 NA other downstream 2487529 5916257 ~ 5917011 (-)
G64564 NA other downstream 3161614 5049155 ~ 5242926 (-)
G67099 NA other upstream 234945 8641690 ~ 8674897 (-)
CI01000010_11929215_11933223 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 3522216 11928448 ~ 11933343 (-)
CI01000010_11965317_11969111 NA other upstream 3558120 11964865 ~ 11969710 (-)

Expression


Co-expression Network