CI01000015_00970175_00973727


Basic Information

Item Value
gene id CI01000015_00970175_00973727
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 970175 ~ 973740 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000015_00970175_00973727.mRNA
CATGGCAGCGCCTCCTCCATGCCAGCTGCATGCCAAGACACAGCTGTGGTGAAGGCAGCAGAGGAGACTTTAGAGCAGATAAATGCAGACAGACAGGAAGGGTATATCCTTACACTGAACCGACTTTATGATGTCAAACAAGACATAAAGGCAGAAGGCGTGAGCAATTTACACCTGACTATAGATGTTCTGGAAACACAATGTCATGTGATCAGCAGGAGAAAATGGAAATCCTGTGCTATTAAGGGGATTGGTAATCTACCGAGCACCATCAAAGTTCAGAATTACAACTGCACCATCCAACAAGTGGCAGCTCGAGCTATAATAAATACTTGCCCTGACTGTCCAACTGCAGAACGGTTAGATGATCCAATTATATCTGAGACCACAAAACTGGCCCTGCAGAAATTTAACAAAGAGAATGATTTCCCCCATTTCTTTGCTCTTCTGAATATAACAGCAGCCAGCATGCAGTGGGTTGTGGGTCCGTCTTACTTTGTGGAGTTCACCATTCAAGAGACCAACTGCAAGAAAAACATTACCGATACTGACTTCACACAATGCATGCTGAAGGATTCAGAGTCAGCTGTAAGCACTTATTTCAGTTCAAAAATCGACAAGCCAGGAATACAAAATTAAACCAATTTTTAAA

Function

NR:

description
fetuin-B, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000015_00970175_00973727.mRNA True 652 mRNA 0.43 5 970175 973740

Neighbor

gene id symbol gene type direction distance location
CI01000015_00890625_00902801 CP coding upstream 67179 890625 ~ 902996 (+)
CI01000015_00886425_00888351 TM4SF18 coding upstream 81369 885231 ~ 888806 (+)
CI01000015_00800582_00853181 WWTR1 coding upstream 116994 800582 ~ 853181 (+)
CI01000015_00790715_00793401 COMMD2 coding upstream 175514 790440 ~ 794661 (+)
CI01000015_00749679_00758875 NA coding upstream 210878 749381 ~ 759297 (+)
CI01000015_01002365_01011214 HYKK coding downstream 28625 1002365 ~ 1011275 (+)
CI01000015_01015968_01016675 NA coding downstream 41883 1015623 ~ 1017700 (+)
CI01000015_01020856_01025441 HOGA1 coding downstream 47116 1020856 ~ 1025653 (+)
CI01000015_01080504_01101091 NA coding downstream 106764 1080504 ~ 1101383 (+)
CI01000015_01288157_01300925 NA coding downstream 314417 1288157 ~ 1301131 (+)
G86933 NA non-coding upstream 313449 656227 ~ 656726 (+)
G86932 NA non-coding upstream 314028 655932 ~ 656147 (+)
G86931 NA non-coding upstream 314253 655318 ~ 655922 (+)
G86908 NA non-coding upstream 378578 590779 ~ 591597 (+)
G86783 NA non-coding upstream 477341 491955 ~ 492834 (+)
G87246 NA non-coding downstream 27501 1001241 ~ 1001459 (+)
G87249 NA non-coding downstream 35632 1009372 ~ 1009607 (+)
G87253 NA non-coding downstream 39844 1013584 ~ 1013801 (+)
G87432 NA other downstream 637343 1611083 ~ 1611387 (+)
G87972 NA other downstream 902264 1876004 ~ 1876594 (+)
G88172 NA other downstream 1410276 2384016 ~ 2526510 (+)
CI01000015_02512276_02523824 NA other downstream 1538358 2511546 ~ 2524572 (+)
CI01000015_03011472_03026518 NA other downstream 2049256 3011472 ~ 3026636 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020619 si:ch211-284e20.8 coding NC_007133.7 CM002906.2 38229321 ~ 38240168 (+)