G87253


Basic Information

Item Value
gene id G87253
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 1013584 ~ 1013801 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU99355
CAATTACAACATCATGGCTGCGTAGAAGAAGGATCCGGGTACTGAAATGGCCAGCCTGCAGTCCAGATCTTTCACCCATAGAAAACATTTGGCGCATCATAAAGAGGAAGATGTGACAAAGAAGACCTAAGACAGTTGAGCAACTAGAAGCCTGTATTAGACAAGAATGGGACAACATTCCAATTCCTAAACTTGAGCAACTTGTCTCCTCAGTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99355 True 218 lncRNA 0.44 1 1013584 1013801

Neighbor

gene id symbol gene type direction distance location
CI01000015_01002365_01011214 HYKK coding upstream 2309 1002365 ~ 1011275 (+)
CI01000015_00970175_00973727 NA coding upstream 39844 970175 ~ 973740 (+)
CI01000015_00890625_00902801 CP coding upstream 110588 890625 ~ 902996 (+)
CI01000015_00886425_00888351 TM4SF18 coding upstream 124778 885231 ~ 888806 (+)
CI01000015_00800582_00853181 WWTR1 coding upstream 160403 800582 ~ 853181 (+)
CI01000015_01015968_01016675 NA coding downstream 1822 1015623 ~ 1017700 (+)
CI01000015_01020856_01025441 HOGA1 coding downstream 7055 1020856 ~ 1025653 (+)
CI01000015_01080504_01101091 NA coding downstream 66703 1080504 ~ 1101383 (+)
CI01000015_01288157_01300925 NA coding downstream 274356 1288157 ~ 1301131 (+)
CI01000015_01307849_01327079 SRFA, SRF coding downstream 293170 1306824 ~ 1328376 (+)
G87249 NA non-coding upstream 3977 1009372 ~ 1009607 (+)
G87246 NA non-coding upstream 12125 1001241 ~ 1001459 (+)
G86933 NA non-coding upstream 356858 656227 ~ 656726 (+)
G86932 NA non-coding upstream 357437 655932 ~ 656147 (+)
G87258 NA non-coding downstream 17636 1031437 ~ 1031846 (+)
G87261 NA non-coding downstream 22897 1036698 ~ 1037314 (+)
G87267 NA non-coding downstream 36461 1050262 ~ 1050542 (+)
G87268 NA non-coding downstream 37000 1050801 ~ 1051036 (+)
G87432 NA other downstream 597282 1611083 ~ 1611387 (+)
G87972 NA other downstream 862203 1876004 ~ 1876594 (+)
G88172 NA other downstream 1370215 2384016 ~ 2526510 (+)
CI01000015_02512276_02523824 NA other downstream 1498297 2511546 ~ 2524572 (+)
CI01000015_03011472_03026518 NA other downstream 2009195 3011472 ~ 3026636 (+)

Expression


Co-expression Network