CI01000015_00890625_00902801 (CP)


Basic Information

Item Value
gene id CI01000015_00890625_00902801
gene name CP
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 890625 ~ 902996 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000015_00890625_00902801.mRNA
ATGAAGGGGCTGCAGTGGACGCTGCTCGGGGTTTTGTGTTGTGCTGGAATTGTGTCTTCTATCACAAGGGAATATTTCTTTGCCATTAAGGAGATTCAGTGGGATTATGCTCCTAGTGGTAAAAATCTGATTCAGAACAAAACCATAAAAGAAGATGAAGAGGCACGGGTGTTTCTGGAGAGGGGAGAGCAGCGGATCGGGCAGGTTTATAAGAAGGCAGTGTACCAACAATATACTGATGCCACCTACAGGCAGGAGATAGAAAAACCCAAGTGGCTGGGCTACCTCGGACCCCTCATTAGTGCAGAGGAAGATGACATAGTTGTTGTGCATCTGAAGAACATGGCCAAACGAGCATACTCCATCCATGCACACGGCCTCAGTTACAACAAGTCCCATGAAGGAGCACTGTATCCCGATTCATCAGAAAAAGAGGAGAAACATGACGATTCAGTGGCCCCTGGGAAGTCTTTCACCTATGTTTGGACTCTACCGACTTCCCATACCCCTGGCAAAGATGACACTACCTGCCTGAGCAGAATATACCACTCCCATGTTAATGCCCCCAAAGACATCACCTCAGGCCTCATTGGACCTCTCATTATATGTAAAAAAGGCTCTCTAGATGTCCATGGCGATAAGACAGCTGACTATCTTTACACCCTTATGTTTACGGTGTCTGACGAGAACCTTAGCTGGTACCTGGATGAAAATATCAAGACCTACTGCTCAGCAGCCGCCAAAGTAAACAAGGATGATGACGGTTTCCAGGAAAGCAATAAAATGCACTCTATCAACGGGTACGTCTACGGCAACTTGCCAGACCTTACTATGTGCGTGGGAAATAAGATCCACTGGCACCTGTTTGGGATGGGTAATGAGGTGGACATCCACTCAGCCTTCTTCCATGGACAGATCCTGACGGACAAGCGGCACCATGTTGACACCATCAGTCTGTTCCCAGCTACTTTTGTTAATGTAGAGATGGTGGCGGACAATCCCGGCCAATGGCTCCTCAGTTGTCAAGTCAATGATCATTTGGAAGCTGGAATGCAAGCCATTTTTGAGATTAAGAAATGTTTCCCAAACGTGCATAAACCCAGACCATTTGGGGAAGTGAGACAGTATTACATTGCTGCTGAGGAACTTATCTGGGATTATGGGCCAACAGAAATAAACCAGTATACAGGGAAGAAACTTGTTGATGACAGTGTATCTGACACTTTCTTTGATTACCGCAATGGTCGCATTGGAGGCAAATACAAGAAGGTCCAATATGTGGAATACACTGATGACACATTCACGAAGCGCAAAGAGAGGACCTCTGAGGAGCAGCACCTGGGAATTCTAGGTCCAGTCATCAGAGCAGAGGAAGGGGACACAATTAAAGTGACATTTAGAAATAAAGCAAGCAGGCCCTACAGTATTCAACCTCACGGAGTGCAATATAGCATAGAAATGGATGGAACACTCTACCATAACGTCCTGGAAGAGACATACACTGCCAAGAAGCTTCGTGAACTCAAGAAAGAAGCAAGAGTGGTTGAGCCACTTCCTGCTGCATTGGTCCGTCCTGACACCACTTACAAATATGAATGGGTGGTACCTAAGGGTGGAGGACCCACCGAAAAAGATCCAGACTGCATCACCTACTTGTACTACTCAGCGGTAGATCCCATCCGAGACACCAACTCAGGGCTGGTTGGACCTCTTCTGATCTGCAAGCCAAAAACCCTCAAATCAGGGAAGCAGAAAAACGTGGAGAAAGAGTTTCACCTTCTTGCAACTGTGTTTGATGAGAATCTGAGCTGGTATTTGGATGACAACATCAACAGATGTGTGAAACAGCCCAAATCTATAAATAAAGAAGATGAAGACTTTCAAGAGTCCAATAAAATGCACTCGCTCAATGGATACATGTATGGGAATCTCAAAGGTTTGAGTATGTGTAAAGGTGATAAGGTGTCATGGCATCTGTCTGGACTAGGATCAGAGGCAGACATCCATGGTCTTTACTTTGAGGGCAACAGGTTTCTCTACAAAGACACCAGGAGAGACACCATCAATGTGTTTCCTCATGTATCTCACACCATCATCATGGAGCCTGACAGCATGGGACAGTTTGAAGTGAGCTGTAAAACCACAGATCATTATCATGGAGGCATGAGAGCCAACTACACTGTGGAGAAGTGTCACTTCTGGAACCGTCAGTCTGAGACGATGCTACACCAGAAGAAGTATTACATTGCTGCAGTTGAGATGGATTGGGACTATTCACCCAACCGCACCTGGGAGGAACAAATGCACCATGGTCTGAAAGAAAGTCCAGGCAACGAGTTCCTCAAGAAAGAAGGAAAATTCATTGGCTCAAAATATAAGAAGGTGCTGTACAGAGAGTACACTGATGAAACCTTCACCAAACTGAAAGACAGACCTGCTAATATGGAACACTTAGGAATTATGGGACCCATGATCCATGGTAAAGTAGGGGAAAAAGTGAAGATTGTGTTTAAGAACATGGCTAAGAGACCGTACTCCATACACGCCCATGGAGTTAAAACTGACAGTCCTCAGGTCGCCCTGACACGTCCAGGTGAAACTCAGACCTATACCTGGTACCTTCCAAAGAATTCTGGGCCGACAGAGGAGCAGGAGGAATGCAGTGTTGGAGCGTATTACTCCACCATAGATGTTATTAAGGACATGTACAGTGGTTTGATTGGGCCGCTGGTCATCTGCAAGAAGAGTCTGGCGCGTACACTGGGGCTGAAGAAAGAGATTGAAGAGTTTGCCTTGCTCTTCATGGTCTTTGATGAGAACGAATCTTGGTATCTGGATGACAACATCAAAGCTCACGTTAAAAACCCTCCAAAAGAACTGAAGGAGGATGAGGAGTTTATCGAAAGCAACAAGATGCATGGAATCAATGGTTTAGTCTATGGCAACCTTAAGGGCTTGAACATGAAGGTCGGAGATAAAGTGTACTGGTATCTCATGGGAATGGGAAACGAGGTGGACATACACACTGCACACTTCCATGGCCACAGCTTTGACTATAAGATCAGTGGTACACATCGAGCAGATGTGTTTGACTTATTCCCCGGAACGTTCCAGACAGTGACCATGCGTCCACTGTATTCTGGCACATGGCTCTTGCACTGTCATGTCACTGATCACATCCAGGCTGGAATGGAGACCACATACACTGTACTCGAAAAAGACGACCTCAGGGAAAAGCTTCTGCCACCACAGAGGCTGGATGAAGACAGTAGTTGTGAAAAGTATAAATTAATTAGAGGCCAGTAAACAAAGACAAAATCTCTGACTGACAAGAAAGTTACACCTTTTATCGCATCACATCACGTTTATTATCACTTTTTTCAACTATCATTGGCAAAGTTGCGTGAGGGCAAAAGATTTTCCCAGATAGCGCATCATGTTCAAGTTTGGGTGAATTAGCTGCAAGCTGTGCTTCGTACATCTATATACAAGGAATGGATA

Function

symbol description
cp Predicted to enable oxidoreductase activity. Predicted to be involved in iron ion homeostasis and iron ion transport. Predicted to act upstream of or within copper ion transport. Located in cytoplasm and nucleus. Is expressed in digestive system; female organism; liver and biliary system; male organism; and yolk syncytial layer. Human ortholog(s) of this gene implicated in aceruloplasminemia; epilepsy; and hemosiderosis. Orthologous to human CP (ceruloplasmin).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K13624 CP; ceruloplasmin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000015_00890625_00902801.mRNA True 3501 mRNA 0.45 20 890625 902996

Neighbor

gene id symbol gene type direction distance location
CI01000015_00886425_00888351 TM4SF18 coding upstream 1819 885231 ~ 888806 (+)
CI01000015_00800582_00853181 WWTR1 coding upstream 37444 800582 ~ 853181 (+)
CI01000015_00790715_00793401 COMMD2 coding upstream 95964 790440 ~ 794661 (+)
CI01000015_00749679_00758875 NA coding upstream 131328 749381 ~ 759297 (+)
CI01000015_00690873_00738349 KCNH1, KCNH1B coding upstream 150909 690478 ~ 739716 (+)
CI01000015_00970175_00973727 NA coding downstream 67179 970175 ~ 973740 (+)
CI01000015_01002365_01011214 HYKK coding downstream 99369 1002365 ~ 1011275 (+)
CI01000015_01015968_01016675 NA coding downstream 112627 1015623 ~ 1017700 (+)
CI01000015_01020856_01025441 HOGA1 coding downstream 117860 1020856 ~ 1025653 (+)
CI01000015_01080504_01101091 NA coding downstream 177508 1080504 ~ 1101383 (+)
G86933 NA non-coding upstream 233899 656227 ~ 656726 (+)
G86932 NA non-coding upstream 234478 655932 ~ 656147 (+)
G86931 NA non-coding upstream 234703 655318 ~ 655922 (+)
G86908 NA non-coding upstream 299028 590779 ~ 591597 (+)
G86783 NA non-coding upstream 397791 491955 ~ 492834 (+)
G87246 NA non-coding downstream 98245 1001241 ~ 1001459 (+)
G87249 NA non-coding downstream 106376 1009372 ~ 1009607 (+)
G87253 NA non-coding downstream 110588 1013584 ~ 1013801 (+)
G87432 NA other downstream 708087 1611083 ~ 1611387 (+)
G87972 NA other downstream 973008 1876004 ~ 1876594 (+)
G88172 NA other downstream 1481020 2384016 ~ 2526510 (+)
CI01000015_02512276_02523824 NA other downstream 1609102 2511546 ~ 2524572 (+)
CI01000015_03011472_03026518 NA other downstream 2120000 3011472 ~ 3026636 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location