G102792


Basic Information

Item Value
gene id G102792
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 1384939 ~ 1385266 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU116945
GATTAGGGATTGGTTAGGTTAAGTCATATGTAATTATGCATAATTTATACTACAGTAACTACATGTACCGTGTAACAGTGGTACTGTAAAATAAAGTGTTACCAAACACTGTATTATGCATGCCAGGCCAGTAGTTGGCGATGTCACTTTGTAAATAAAAACTAGGTGCCTATAATAGGTAAACTATAATAGAATAAACAAGTAATACACATACGCATGACGTCACCGTTTTCACAAATTCCTGTTTTGTAGTTTACAAGGAGATGATAGCTGTATCATTTTCGAAAACATGCACTTTGAAACCTGTTTTCAAAAGTTTTTAGGCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116945 True 328 lncRNA 0.34 1 1384939 1385266

Neighbor

gene id symbol gene type direction distance location
CI01000018_01378078_01379655 SOCS6 coding upstream 5261 1377567 ~ 1379678 (+)
CI01000018_01237799_01262508 DOK6 coding upstream 122431 1237799 ~ 1262508 (+)
CI01000018_01162096_01176494 CRISPLD1A coding upstream 208199 1162096 ~ 1176740 (+)
CI01000018_01130413_01157978 PI15A, PI15 coding upstream 226940 1129786 ~ 1157999 (+)
CI01000018_01117105_01119896 NA coding upstream 264795 1116757 ~ 1120144 (+)
CI01000018_01588236_01598892 NA coding downstream 202767 1588033 ~ 1599250 (+)
CI01000018_01709643_01800520 NETO1, NETO1L coding downstream 324377 1709643 ~ 1800520 (+)
CI01000018_01815173_01819759 NA coding downstream 429907 1815173 ~ 1820017 (+)
CI01000018_01821013_01821973 NA coding downstream 435112 1820378 ~ 1822344 (+)
CI01000018_01900038_01904335 NA coding downstream 514772 1900038 ~ 1904406 (+)
G102847 NA non-coding upstream 18933 1365698 ~ 1366006 (+)
G102772 NA non-coding upstream 100739 1284051 ~ 1284200 (+)
G102766 NA non-coding upstream 188874 1195750 ~ 1196065 (+)
G102745 NA non-coding upstream 206500 1177806 ~ 1178439 (+)
G102746 NA non-coding upstream 207223 1177412 ~ 1177716 (+)
G102856 NA non-coding downstream 6820 1392086 ~ 1392438 (+)
G102873 NA non-coding downstream 37083 1422349 ~ 1422584 (+)
G102877 NA non-coding downstream 42285 1427551 ~ 1427759 (+)
G102881 NA non-coding downstream 68394 1453660 ~ 1453976 (+)
G102793 NA non-coding downstream 70619 1455885 ~ 1555545 (+)
G102895 NA other downstream 197647 1582913 ~ 1585662 (+)
CI01000018_01924489_01985310 SEMA5A other downstream 583986 1924489 ~ 1985311 (+)
G104258 NA other downstream 2305823 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 2984920 4368179 ~ 4375866 (+)
G104670 NA other downstream 3370535 4755801 ~ 4759768 (+)

Expression


Co-expression Network