G102873


Basic Information

Item Value
gene id G102873
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 1422349 ~ 1422584 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU117032
CTCGGGACCACTGGGCTTTGATGTGCTGAGACCACGGACTTGGCACCACCGGACTTAGGGCCGCTGGGCTTGAGGGAGCTAGGCCTGCCGGGCATTGTATGCCAGCCGCTCGTGCCGACATCAGAGGAGGATCTGCCACACTGGATACCAGTTTCCTCCACCCTGAGATGGATACAGTGGCCGGGACTGTACTGGTGTCTGGGATGGTAACTGTGGTGGATCAAGCTCTATGGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117032 True 236 lncRNA 0.60 1 1422349 1422584

Neighbor

gene id symbol gene type direction distance location
CI01000018_01378078_01379655 SOCS6 coding upstream 42671 1377567 ~ 1379678 (+)
CI01000018_01237799_01262508 DOK6 coding upstream 159841 1237799 ~ 1262508 (+)
CI01000018_01162096_01176494 CRISPLD1A coding upstream 245609 1162096 ~ 1176740 (+)
CI01000018_01130413_01157978 PI15A, PI15 coding upstream 264350 1129786 ~ 1157999 (+)
CI01000018_01117105_01119896 NA coding upstream 302205 1116757 ~ 1120144 (+)
CI01000018_01588236_01598892 NA coding downstream 165449 1588033 ~ 1599250 (+)
CI01000018_01709643_01800520 NETO1, NETO1L coding downstream 287059 1709643 ~ 1800520 (+)
CI01000018_01815173_01819759 NA coding downstream 392589 1815173 ~ 1820017 (+)
CI01000018_01821013_01821973 NA coding downstream 397794 1820378 ~ 1822344 (+)
CI01000018_01900038_01904335 NA coding downstream 477454 1900038 ~ 1904406 (+)
G102856 NA non-coding upstream 29911 1392086 ~ 1392438 (+)
G102792 NA non-coding upstream 37083 1384939 ~ 1385266 (+)
G102847 NA non-coding upstream 56343 1365698 ~ 1366006 (+)
G102772 NA non-coding upstream 138149 1284051 ~ 1284200 (+)
G102766 NA non-coding upstream 226284 1195750 ~ 1196065 (+)
G102877 NA non-coding downstream 4967 1427551 ~ 1427759 (+)
G102881 NA non-coding downstream 31076 1453660 ~ 1453976 (+)
G102793 NA non-coding downstream 33301 1455885 ~ 1555545 (+)
G102804 NA non-coding downstream 67168 1489752 ~ 1491444 (+)
G102797 NA non-coding downstream 177698 1600282 ~ 1600592 (+)
G102895 NA other downstream 160329 1582913 ~ 1585662 (+)
CI01000018_01924489_01985310 SEMA5A other downstream 546668 1924489 ~ 1985311 (+)
G104258 NA other downstream 2268505 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 2947602 4368179 ~ 4375866 (+)
G104670 NA other downstream 3333217 4755801 ~ 4759768 (+)

Expression


Co-expression Network