RNA id: TU117032



Basic Information


Item Value
RNA id TU117032
length 236
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G102873
representative True

Chromosome Information


Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 1422349 ~ 1422584 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTCGGGACCACTGGGCTTTGATGTGCTGAGACCACGGACTTGGCACCACCGGACTTAGGGCCGCTGGGCTTGAGGGAGCTAGGCCTGCCGGGCATTGTATGCCAGCCGCTCGTGCCGACATCAGAGGAGGATCTGCCACACTGGATACCAGTTTCCTCCACCCTGAGATGGATACAGTGGCCGGGACTGTACTGGTGTCTGGGATGGTAACTGTGGTGGATCAAGCTCTATGGCCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU117015 lncRNA upstream 29911 1392086 ~ 1392438 (+) True G102856
TU116945 lncRNA upstream 37083 1384939 ~ 1385266 (+) True G102792
TU117006 lncRNA upstream 56343 1365698 ~ 1366006 (+) True G102847
TU116924 lncRNA upstream 138149 1284051 ~ 1284200 (+) True G102772
TU116917 lncRNA upstream 226284 1195750 ~ 1196065 (+) True G102766
TU117036 lncRNA downstream 4967 1427551 ~ 1427759 (+) True G102877
TU117040 lncRNA downstream 31076 1453660 ~ 1453976 (+) True G102881
TU116946 lncRNA downstream 33301 1455885 ~ 1555545 (+) True G102793
TU116957 lncRNA downstream 67168 1489752 ~ 1491444 (+) True G102804
TU116950 lncRNA downstream 177698 1600282 ~ 1600592 (+) True G102797
CI01000018_01378078_01379655.mRNA mRNA upstream 42671 1377567 ~ 1379678 (+) True CI01000018_01378078_01379655
CI01000018_01237799_01262508.mRNA mRNA upstream 159841 1237799 ~ 1262508 (+) True CI01000018_01237799_01262508
CI01000018_01162096_01176494.mRNA mRNA upstream 245609 1162096 ~ 1176740 (+) True CI01000018_01162096_01176494
CI01000018_01130413_01157978.mRNA mRNA upstream 264350 1129786 ~ 1157999 (+) True CI01000018_01130413_01157978
CI01000018_01117105_01119896.mRNA mRNA upstream 302205 1116757 ~ 1120144 (+) True CI01000018_01117105_01119896
CI01000018_01588236_01598892.mRNA mRNA downstream 165449 1588033 ~ 1599250 (+) True CI01000018_01588236_01598892
CI01000018_01709643_01800520.mRNA mRNA downstream 287059 1709643 ~ 1800520 (+) True CI01000018_01709643_01800520
CI01000018_01815173_01819759.mRNA mRNA downstream 392589 1815173 ~ 1820017 (+) True CI01000018_01815173_01819759
CI01000018_01821013_01821973.mRNA mRNA downstream 397794 1820378 ~ 1822344 (+) True CI01000018_01821013_01821973
CI01000018_01900038_01904335.mRNA mRNA downstream 477454 1900038 ~ 1904406 (+) True CI01000018_01900038_01904335
TU117055 other downstream 160329 1582913 ~ 1585662 (+) True G102895
TU117572 other downstream 546668 1969252 ~ 1985311 (+) True CI01000018_01924489_01985310
TU118573 other downstream 2268505 3691089 ~ 3691519 (+) True G104258
TU118875 other downstream 2947602 4370186 ~ 4373412 (+) True CI01000018_04368179_04375192
TU118997 other downstream 3333217 4755801 ~ 4759768 (+) True G104670

Expression Profile