XLOC_008239 (CU695208.1)



Basic Information


Item Value
gene id XLOC_008239
gene name CU695208.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 2358511 ~ 2358625 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00016611
ATTAGCAGCTAGCTTACTGCGACTTTCACATGGTcatccactgaagctaagcagggctgcgcccggtcagtacctggatgggagaccacatgagaaagctcggttgctgctgaaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113580

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00016611 True 115 rRNA 0.53 1 2358511 2358625

Neighbor


gene id symbol gene type direction distance location
XLOC_008237 sbds coding upstream 460278 1891689 ~ 1898233 (+)
XLOC_008236 CU638704.1 coding upstream 484733 1873658 ~ 1873778 (+)
XLOC_008235 fam124b coding upstream 556477 1796313 ~ 1802034 (+)
XLOC_008234 cul3b coding upstream 562880 1765988 ~ 1795631 (+)
XLOC_008233 otol1b coding upstream 647039 1705167 ~ 1711472 (+)
XLOC_008240 hephl1a coding downstream 62807 2421432 ~ 2472933 (+)
XLOC_008241 panx1a coding downstream 117269 2475894 ~ 2489934 (+)
XLOC_008242 wdr53 coding downstream 139871 2498496 ~ 2507988 (+)
XLOC_008243 cux1b coding downstream 161694 2520319 ~ 2543834 (+)
XLOC_008244 SH2B2 coding downstream 201250 2559875 ~ 2578139 (+)
XLOC_008463 BX663520.1 misc downstream 18893566 21252191 ~ 21252282 (+)
XLOC_008232 NA non-coding upstream 639882 1693197 ~ 1718629 (+)
XLOC_008230 dre-mir-16a non-coding upstream 814568 1543857 ~ 1543943 (+)
XLOC_008229 dre-mir-15c non-coding upstream 814743 1543686 ~ 1543768 (+)
XLOC_008225 NA non-coding upstream 1123818 1221817 ~ 1234693 (+)
XLOC_008245 CR382327.2 non-coding downstream 315310 2673935 ~ 2674590 (+)
XLOC_008246 CR382327.3 non-coding downstream 326430 2685055 ~ 2685706 (+)
XLOC_008247 NA non-coding downstream 455445 2814070 ~ 2815714 (+)
XLOC_008248 NA non-coding downstream 486187 2844812 ~ 2855629 (+)
XLOC_008250 NA non-coding downstream 506999 2865624 ~ 2865929 (+)

Expression



Co-expression Network