XLOC_008235 (fam124b)


Basic Information

Item Value
gene id XLOC_008235
gene name fam124b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 1796313 ~ 1802034 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016605
ataaataatttggctaataattttgacctcagcTCTACATAAATCACGCTACTATTAGTACAATCAAACCCCCCTCTACCATCTTTAATTGGTGAATTTTGCAGTCTGATGATGACAGCCATCTGCTGGGGTTCAGTCCCCCTATTGTCAGAACTGAAGCCCTTCCCCCGACTCCAAACCACCGCTCATTTTGCAGCCGAGTTCTCCAAATACACACGATGTGCTAACCTTGAGATAAAACACAACGCTGCAGCACTCGTGTTTAATGTGTTTATGTACAGTACACCGGATTATCATGAATTATAAACGCTGAGGTGACGTCAGGGTGAACTCGACTCTTACGGACTCCTTTTCCTTGACCAGTCGGACTTTCTCTGAGCTGACCTCATGGCTAACCCCGATACAGATTTGCTCCTGGTCACCATGCACTTGCTGACCAACCCCGGCGACTCTCTCCTACTCCAGCACACCCTTGACTGCCTCCTGAAGTGGGTTCGTCCGGGTCTCAGACTCTTCCACGTGTCTGAGCGGGCCTGTCCCATCCATGCCTATGACAGAACCAACCTGTGCCCTGCATCCGGCTACCCGTCACATGCGGTGACCATATTCCTGCACGAGTCCTACGGAGAAGAGCGTATTCTTAGGGTGCTGGAATTTCTGCAGTGTCCACCCTGGCAGTATCATCACACTGAAAGCTGCGGTGCTAAAGAGAGCGGAGTTTATATTACATCCAGCAGCACCCTACTGAAGCCCTACTTCATGCCCAGCCGGGACTACTACAGCCTGGGCACTGGAATGCCGGTGTGGGGGGTGCGGTCGGTGCACTACGGAGAGGAGTTAGTGCGCGTGACTTTGCACAGTAGCTTTGATAACTATGAGGACATCGTGCGTTTATATGAGACGGTCCTGCAGAAGAGGGCGGAGGAGCAGAAACCGGGCTTTTGCTGGTTTACTCTGCTTGCAGAACAAGGGTTTAGCCTGCAGTTGGCCATCAAGCAGCTCTCGCCGGGGGTCCGCGTGGAGCCTTGCCAATCCGCCGTGCTGCAGTTTAGAGTGCGAGAGATCGGACAGCTTGTCCCCTTGCTGCCTAACACCTGCTCGCCTATCAGTGCTACCCGATGGCACACTGAAGACCTGGACGGGAACAAGATCCTCTTTCAGGTGAAACCTCCAGCTCAGCCCCAGGCCTCCCACACCTCGGCTTTCCCCCTGAGTGGCGCCAGTCTTCCCTCCAGAATTCGGCTGCGGAGCTCCGGTGCCTCCAGACCCTCCACATCTCCCTGCAGGACACCATCTCATATGAAGGAGCAGATGACGGGACGCTCTTGTGTGGATCTGCTGGAGCCCCGTGTGCTGAGATCGGGGACGTGTGGAGGAGAGAGTATGGGTTCAGACGGGGCGGGCAGCACTCCTCCGGGAAGCTCCTGTTACTCGTCCCAGCGCAGTAGCCCTGCAGGCCTGTCCGCTAGCTGGTATGAGCCAATGATGGCCTCTGAATCCTCCATACCCTGCCTCttgctggaggaggaggaggaggattcGGAGACTAATGTGGACACGGGCTGTGCCGTACACACACAGTCCGCTCTGGTGACTCTGAGTAGAGACCTGAGACACGGCCTGGAGGAGGCAGAAAACTCAACAAGTATTTTAACAGAAACACAGAACTCACAGAGCCGCCGTCTGCATGCTCAAGTAGATGAGTTCTTCATTTGA

Function

symbol description
fam124b Located in mitochondrion and nucleoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087489

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016605 True 1716 mRNA 0.54 3 1796313 1802034

Neighbor

gene id symbol gene type direction distance location
XLOC_008234 cul3b coding upstream 682 1765988 ~ 1795631 (+)
XLOC_008232 NA coding upstream 77684 1693197 ~ 1718629 (+)
XLOC_008233 otol1b coding upstream 84841 1705167 ~ 1711472 (+)
XLOC_008231 nmd3 coding upstream 123852 1653779 ~ 1672461 (+)
XLOC_008228 smc4 coding upstream 223184 1534644 ~ 1573129 (+)
XLOC_008236 CU638704.1 coding downstream 71624 1873658 ~ 1873778 (+)
XLOC_008237 sbds coding downstream 89655 1891689 ~ 1898233 (+)
XLOC_008238 rsrc1 coding downstream 388195 2190229 ~ 2415435 (+)
XLOC_008239 CU695208.1 coding downstream 556477 2358511 ~ 2358625 (+)
XLOC_008240 hephl1a coding downstream 619398 2421432 ~ 2472933 (+)
XLOC_008463 BX663520.1 misc downstream 19450157 21252191 ~ 21252282 (+)
XLOC_008230 dre-mir-16a non-coding upstream 252370 1543857 ~ 1543943 (+)
XLOC_008229 dre-mir-15c non-coding upstream 252545 1543686 ~ 1543768 (+)
XLOC_008225 NA non-coding upstream 561620 1221817 ~ 1234693 (+)
XLOC_008218 CU571333.1 non-coding upstream 717209 1078989 ~ 1079104 (+)
XLOC_008245 CR382327.2 non-coding downstream 871901 2673935 ~ 2674590 (+)
XLOC_008246 CR382327.3 non-coding downstream 883021 2685055 ~ 2685706 (+)
XLOC_008247 NA non-coding downstream 1012036 2814070 ~ 2815714 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000091_00457499_00460775 NA coding CI01000091 null 457499 ~ 462653 (+)