XLOC_008366 (clca5.1)


Basic Information

Item Value
gene id XLOC_008366
gene name clca5.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14154174 ~ 14163546 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016765
GACTACAGCAGGCTGCTGATTATTTCATTCGGAACATCATTGAGGATCAATCCAGTGTCGGAATTGTGACCTTTAATACTGATGCTTCTCTTCTCAGCACCTTGACTACCATTGATAATGAGTCCACACGAGTAAATCTTGTCAATTTGTTGCCAAAAAAAACAGAAGGTTGGACATACATGTGTAAAGGCCTTAATCTAGGCTTAAAGGTACTCAAAATGGACGATCAAGGTGTATTAGGAGATGAAATCATTTTTTTGACAGATGGTGAAGCAACAGACAACATTAGTTATTGTGTTCCAGCTGCGATAAACAGTGGTGCCATTATACACACAATAGCTTTGGGTGATAAAGCAGATAAAGCACTGAGAGAAATGGCAGACAAAACTGGGGGGAAATTTATCACAGCCAGTGATGATGTTCTCTCTAATCAGCTACTGAATGGATTTTCTTCACTAACAATGCCAACAGGGAACCAAACAAAAGATCCAGTTCAGATAGAAAGTGTGGGGAAAAAAACATCTGACTGGTTCAATGGGACAGTATCAGTGGATCAGACTATCGGTTCCAAAACTAGCTTTACAATAACCTATGAAGCCAGTTTTCCTCATGTTTCCATACAATCCCCAAATGGTTCAATCTTCAATCAAACGCAGATGCATCATGAAGAATCAGGAAGAACAGTCACTCTAAAAATTCCAGGAATTGCACAGCCTGGGGACTGGAAGTACAGTATCTTAAGTCCAAGACATCAGGTTCTGACTGTAACAGCGACGAGTTCTGCGGCGCATGCAAATGTTCCTCCCATCATTGTCAAAGCCCAAATGAACCAACAGTTCAGCGATGGCAGTAAAGCTATGATAGTGTTTGCTGAGGTTAATCAGAACTACAAGCCAGTCATAAATGCTCATGTGTTTGCTACAGTGGAGTCTGAATTTGGGTCTGCACAAACATTTCAACTCCTGGACAATGGAACAGGTGCTGATGCTTTTAAAGATGATGGAGTCTATTCTAGATTTTTCACACGGATGAAAAAAGGAAGAAGCAGCTTGaaaataagtgttaaaaataaagaTGGACAAGCCAGATTTGCTCTTCAAAAGAGAGGTGGTGCACCATACGTACCAGGATATGTGGTGGACGGTGTAGTGGAGCTGAACCCACCAAAGCCTTTAGTTTCTGAGGAACTACTGGAGGTTGGAAGCTTCACCAGAACAGCCACCGGTGAGAGTTTTGAGGTAATAAGCTCAATTACACCAAATTTCCCTCCTAACAAAGTCACAGATCTGAGTGCTGAGATCCAAGAGGAGGCTGTGCTTCTCAGCTGGACGGCTCCTGGTGAAGACCTTGACCAAGGGACAGCTGAATCCTATGACATCAGGTGGAGCTTTGACCTAAAAATACTTCAACAAAACTTCAGCGAAGCTCATGCAGTGAACACATCTGCCATCTCACCACAGGTGTTTGGATCAGTTGAACAGCACACATTCATTCTCAGTTTACCAATCCAAAATGGCACCACGCTCTTTTTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099606

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016765 True 1532 mRNA 0.42 8 14154174 14163546

Neighbor

gene id symbol gene type direction distance location
XLOC_008364 clca1 coding upstream 33743 14109652 ~ 14120431 (+)
XLOC_008363 BX927244.2 coding upstream 100708 14045121 ~ 14053466 (+)
XLOC_008362 zgc:162730 coding upstream 167413 13984879 ~ 13986761 (+)
XLOC_008361 CABZ01056919.1 coding upstream 196324 13957722 ~ 13957850 (+)
XLOC_008360 CABZ01009247.1 coding upstream 629186 13524874 ~ 13524988 (+)
XLOC_008367 si:dkey-243k1.3 coding downstream 38568 14202114 ~ 14206065 (+)
XLOC_008368 NA coding downstream 85843 14249389 ~ 14249929 (+)
XLOC_008369 si:ch211-11n16.2 coding downstream 215283 14378829 ~ 14420564 (+)
XLOC_008370 FBXO46 coding downstream 429078 14592624 ~ 14600296 (+)
XLOC_008371 sars2 coding downstream 479095 14642641 ~ 14667095 (+)
XLOC_008463 BX663520.1 misc downstream 7088645 21252191 ~ 21252282 (+)
XLOC_008359 CABZ01009248.1 non-coding upstream 644806 13421514 ~ 13509368 (+)
XLOC_008358 NA non-coding upstream 1017710 13001193 ~ 13136464 (+)
XLOC_008379 NA non-coding downstream 1184096 15347642 ~ 15351457 (+)
XLOC_008384 NA non-coding downstream 1287257 15450803 ~ 15452516 (+)
XLOC_008388 NA non-coding downstream 1465960 15629506 ~ 15665686 (+)
XLOC_008390 NA non-coding downstream 1615442 15778988 ~ 15782552 (+)

Expression


Co-expression Network