CI01000026_04126777_04133370


Basic Information

Item Value
gene id CI01000026_04126777_04133370
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 4125104 ~ 4134671 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_04126777_04133370.mRNA
ATAGTGCATTTTCCATTTCTCTCTAACTGAGTTCTCTGTTGTTTTTCAGGCATCATCTATGAGCTACAATGAAGCAGAACCCAAAGACTGTAAGGATGTGGATGATCATCTGTCTTTTGTTCAGTTTGGGTCTAGGTAAGTAGGCGATCACCAAGGAAGTGAAATTATGTACTAGTTGCATATTGATGATGGATTACTGTTAGCATCTTGTTTAAAGCTGCAGTCTGTAACTTTTTTGGTTAAAAATGATCCAAAATCAATTATTGAGCAAGTACATTACCAGCCAGTGTTCAAAACTATCTCCTTACCTTAGCCCGACTCACAACGGTAAGCTTGTAATGTTTTATAATTTGAGTGGTACTGGTAGATTTCCGCGGGAAATACGAGTTTGCCTTTGCGTCATTACGTCACATCTGTATATATAAAGAAGGAGTCCCGGATGCTGCAGGCGGCAGATCATTTATATATTATTTTTTATATATATATATTATATATTATCATATATATTATTTTTCTCACAGCAGCTGGAATAATTAAACATCATTTTGATGGTGGGTTGTAATCCAGAAAGGTCCGAATGACAATCATTAGTGACAACTAGAGATTCACCCGTAAAAAAAACATCAAAAGCAAAAGACTTTGGAAGCTAATACAGACTAAATACACAGTCACGCAATGCTGATGTTGTTAACATGTTGAGAACAAAGTATAACAATAATAATCATTTGCACATTTTGATGTGATATGAGATAAGCGATTGTTAGATTTAATCACCATTGGCAGCGCGATTTATTGTAATGCTTTTATTTCTCAGTTGGTCAGAACAAAAGTGGCAGATTTGTTACTTGTTCAGATGACATTTTCCGATGAAAATTCTTATTATCTTAAAATTCTTATGGTCATGCTTCCTAGACATAGAATCTGTGATTCCGAAGTACAGTATCCACACCGGTGTGGTGACTGACAGCCACACATTCTCCTAGACATTAGATTCATCCGCACTGAGGAGCCGTGCCGATGCACAACCCACGTAAATAATAATTCCGGAAATAACTGCAATTGCAGGTTTCAAACAGAGAAGGCGACAAAGAGGCAAAACTTACGCTCTGCATCTTTAATGAATCTATTTTTAGAAATAAAATGCACATTTGATTATGTAATATTTGGGATAGTTTGTTAGAAATACTTTTAGAATTCAAATCAATACATTTTGCAGGTAACATTTATTTATATTAATTTTATTTACTTATTTACAATATTTTGTTCATTTAGCAGCAACAGAGAATGACAGAGACTTTAAGATGTGTGGAACATGGAGCCATGGCAGTGCACTCCGAAATCTGAAATATGATTTGAGAAAAGGCTGTAAGGCAATTGAGATTTCTGCCAATGAGATCACGCTCTCTATTCGGGGCAGCATCACAGCGAAGTGCACACGATCTTCATCAATTCTTCTGAATTCAAAACCTCTTCAAAATCAAAGTGATTTCTGTGTGTTCTGGGAGCCACTGCTGGACCTGCTGATAGTGGAGGTGAACAGAAAGAATCACACTCTGTGTGAACCAAAAGACCTTCAAGAAAACTGCTGCACTGACCTCTCACTAAGGGAGCAGAAAAATGGTGGTCAGTATGGTATTGTGAAAGGCAGCATCCATGGAGATATCCTCACCAACAATATCATGGAAAAATATACATTTGAAGGACAGTCAATCAACTGCAAGAAGAAGTTCTGTGATGAGGCTATAAGTCAGACATCCAGAGGAGCAAACATGATAGAGAATGTAGTGATGAAATCTAATACAACAGGCCGTGTGGATCTACCTTGTGCTCAGAGCACAGTTATTGAGATGGAAGAGGGCTTCACAGGACGCTATTTAACTCTGCCAGCCTCTCAAACTAAAGCACCAAACATGATACCCTCCGTTTATCTTCCCTCCTGCCTGAAATCAGCATCAAAGAGAACATCCAAAGTGGTGTGTACTTACTACAAGGACAAGAATTTATTTCAGGGGGGACCTTCTGATTCAAGTCTTCTGGATGATGTAGTTGGACTCTCTGTGGAAAATGAGATTATCGAAAACCTCCCAGAACCTGTCAAAATCACGTTTCACCACCTTCCCTTTCCAGCTAACTGGTCTAGAAAATGTGTTTCATGGGACACAAGAAAAGACAATGAAGTGAAATGGAGAGGCGATGGTTGTGAAACGGTTAACATCAATGAAAGAGAGACAGAATGTCACTGTAATCACCTTACATACTTTGCTATTCTTGTGCAAGTGGAACAGAAGGCTACAGTTCGCCATCTAGAGGCTCTGACGTTCATTACCGCTGTGGGCTGTGCCGTGTCTTTAGTTAGCTGTTTGGTTCTCTTCTATTGGCTCTGTAAACGCAGAATAGGGAAGAAAAACCAGACCTCACTGGTGCACCGTGGTCTGGTGGTGGCAATATTTCTTTTGTGCTTGTTCTTCATTCTTACCGGTACAGTGGCCAATGTTGAAAATAAAACAGCTTGTAAGATAACGGGATCTCTTCTGCATTACTCGTTGCTCAGCACCCTCTGCTGGATGGCTATGGAAGTGTTTCACACATTTTTGTTAGTCCGCAAGGTGTTCAGCTCAACTATTCCTCCATGGGTCTTTTACTTGGGGGGATTTGGTCTCCCAGCTCTGCTAGTCACCATACTGCTCTCAATAGGGGATATTTATGGCGAAAGGAAGATTGTACCAAGTGAAAATATCACCAGTCCTTACCGCATGTGCTGGATGTCGGATAAGGACAAGAGTCTACTGGCCCATTACATCATTAATATTGGCTTACTGGCTGTTGTGGTGAGCTCTGGTGCAGTCATGCTTTTCCTTGTGGTGAAGGAGATCCGCAATCGACCCGAATGGAAGAACATTCACGTGTCTTTTCTCAGTATCTGGGGTCTCACCTGTCTGTTTGGCACAACTTGGGGCCTCGGTTTCCTTGATTTTGGCCCTCTCTCAGAGGCTATCCTCTTCCTCTTCTGTATTATCAATTCCTTACAAGGGTTTTTTCTCATGCTGCGATACTATGCTCTTGAGCGGATGAAAAAGAAAGATGACTCCAGTTCGGATGGGAGCAGTTCTGCATCTTCAAAACAGCATATGCTACAGACTAATGAAAATAGTTAAAAGTCTGGTGAAGCTCAAACAGTGTCTTTCTGAAATTGCCAAATTTCACAGGTTTTTTTAACCATGAAAAATTATCCACAAAAGGCATTTGTAAAGATAATTTTATATCCTGCTGGTCAGGAAGTTGAAAGTTCCTCAGATGACATTGCAATGTCATTGAGTTACAGAGCGTTAGATAATTGAGCATAAATGCTTCACCTGTCATAAGCTGCATTTCTGTATTCATAGTCTTAGTATGAGTATAATAGTTTGTTTCGTTTTCTTAAGTGACCCTTGCACTTTAGCTTTTTTTTTTACAACTGTGTAGAACTGCTGTATTCATTGTGATGTAAATAGGAGTTCTAGCAAATCACTTTTTTAGTAAGAAAAAAAAAAAAAATTCATTTTGTGGTCAAAAAGTAGTGAGTTGTGTGAGACGAGTTAAAGTGTTTGTGCAAGTTTAAACTGCCAGTGCATTCCTCAGTGTGTATTTTCAGAATTAAGGTAAATGAGCTCAGCAAACTCTGTATTTTGTTTAGTTCTGTCAGAAGTTGCACTTTCTTTTATTCAGAGTTTTGTAATGAAGCAAAGTAAAGCACAAACTTTACTTTTTGGTTTGTATTAAGTATTTTTATGTGTATTTCTGTTGGAATATAATAATATGGAATACATAATATAAATATTATTGGTGTTTGGTGATTTTTCTTTTACTTTTTTTTACCTTAATTGTTTTTTTGTTTTGTTTTTTGGACATCTTTTATAAGACCAGGTGGGTAGATGGGTAAAAAACAATAATAATATAAAAAACTAATATTAATAAAAATATATAAAATATAAAAATATATATTCAGCACCAAAAAGAGTTCTGATATTGTTAGAAACAACCAAAGAACCCTAATCTGTTTATGTTTATAACCATTTTATCGGGCATGTTATTTATTCATAAAATCATTACAGTTTTTCTCGATTGCTTAAACACATTTCTTGAAACTATTCCTCATATTCTCAAAATAGTAAACACAAATCCATAACGTCTCACCCAAATCCCCAAACATCCTATTTTCAGGTCAAAATGAAGCTCCACACTCAAAACCATTCACTCTTGCTGAAAAACCAAACCTTGCCCTCAGACATCACACACAAACCCTCAAAAACACACACACTACAACATAGTCTTACACACTGGTGAGATAAATTCAAAACAAAAACCAGTAATAAGTTGTGTGTACTTGTGGTTCTCCACCTCAAGGAAGTTTTCACATGAGGAACACATGTATTTGCACATTTTCTATTCCTGAATGTACTGTACATTACAATACACCAAACAACAAAAAATATTCTGCCCCAGCATCACATCTTTGGTCTTGGACAGGCCAGAGAATCTCATCAACTTCACAGGCTGTACTGACCCTAGCCAGTCAGCGGGGCAAATACACGTGTTCCGAATGGAAGAACATTCACGTGTCTTTTCTCAGTATCTGGGGTCTCACCTGTCTGTTTGGCACAACTTGGGGCCTCGGTTTCCTTGATTTTGGCCCTCTCTCAGAGGCTATCCTCTTCCTCTTCTGTATTATCAATTCCTTACAAGGTAAGCTTTTTCTTGAATGCAGTATCACAAAATACACAAGGTCAGATAATGGCTAGGCTATTGTGTCAATGTAACTTGATTTCCTGTTGCGACGTATAAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_04126777_04133370.mRNA True 4828 mRNA 0.38 12 4125104 4134671

Neighbor

gene id symbol gene type direction distance location
CI01000026_04083042_04094349 NA coding downstream 30037 4082797 ~ 4095067 (-)
CI01000026_04067135_04076151 SLC7A6 coding downstream 48953 4066989 ~ 4076151 (-)
CI01000026_04038343_04060958 SCUBE2 coding downstream 64146 4037500 ~ 4060958 (-)
CI01000026_04035446_04036660 TMEM9B, TMM9B coding downstream 88444 4034428 ~ 4036660 (-)
CI01000026_03973706_04011187 ST5 coding downstream 113917 3973280 ~ 4011187 (-)
CI01000026_04154066_04159758 NA coding upstream 19381 4154052 ~ 4159758 (-)
CI01000026_04255428_04291509 NA coding upstream 120484 4255111 ~ 4293947 (-)
CI01000026_04341911_04342442 NRN1LB coding upstream 207006 4341677 ~ 4342442 (-)
CI01000026_04359229_04359987 THAP11 coding upstream 224087 4358157 ~ 4360456 (-)
CI01000026_04396015_04397830 FBXL8 coding upstream 261234 4395905 ~ 4397921 (-)
G129581 NA non-coding downstream 2409 4122396 ~ 4122695 (-)
G129579 NA non-coding downstream 5614 4119148 ~ 4119490 (-)
G129578 NA non-coding downstream 6924 4112623 ~ 4118180 (-)
G129460 NA non-coding downstream 485596 3639200 ~ 3639508 (-)
G129457 NA non-coding downstream 494731 3630120 ~ 3630373 (-)
G129603 NA non-coding upstream 59498 4194169 ~ 4195468 (-)
G129638 NA non-coding upstream 116246 4250917 ~ 4251178 (-)
G129642 NA non-coding upstream 127110 4261781 ~ 4266880 (-)
G129476 NA other downstream 454220 3670574 ~ 3670884 (-)
CI01000026_03439507_03490314 PDE3B other downstream 634601 3438795 ~ 3490503 (-)
G127418 NA other downstream 2388998 1735777 ~ 1736220 (-)
CI01000026_00986386_01002180 NA other downstream 3122515 986182 ~ 1002180 (-)
G129658 NA other upstream 232625 4367296 ~ 4373069 (-)
G129750 NA other upstream 678379 4785885 ~ 4820249 (-)
G130256 NA other upstream 2140840 6275511 ~ 6317154 (-)
G131742 NA other upstream 4172105 8306776 ~ 8307707 (-)
G132575 NA other upstream 5252480 9387151 ~ 9387716 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034790 adgrg1 coding NC_007118.7 CM002891.2 28668979 ~ 28696556 (-)