CI01000026_11241496_11246081


Basic Information

Item Value
gene id CI01000026_11241496_11246081
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11241496 ~ 11246204 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_11241496_11246081.mRNA
AGCTGGAAAGGGTGAGAAAGCTCGGCGTGAAAAAGTGGAGCAGAGCGAGAATCAGGAGCAGGAGGCTGAGGCGGGACCTTCTAGGAGGTCAACTGATGATCAGATTTCTCTAGAGCACATCACATGTACTGTAGAGGACTGTGATCATCAGGAGCCTCCTAGCAGCAGCCCTGACGCCCTCGAATCTTCTGAGGAGCAGAAGATGCAGGAGCTCCTTCAACCTCGTGTCCAAGACAGTCCAGTTATTCTGTCTGAAGGTGAGATTGAGTCCCCTCAAACAGAACAACAGGACGATGACGTGAGCATGAGCATCGAGGATTGCTCTGAAACTTGCTCGAAAACCGGAACCATGGAATATATCAACATTCCTGATCATCCCAAACCCGTTCCCCTGGAAATCGGACTGACAGTCCTTGCCAATAAGGGCCCCAGCACACCCCACATCATTAAGTTGCTGGACTGGCAGGACCTCCCCAACCATTATATCATGGTCCTGCAGCGGCCCTCGCCCTGTGTCAATCTCTTTGAATTTTTGAAAAGCTGTGGGGGCATCTTCAAAGAAGAGATTGCACGCCATGTGATGCGGCAGGTGGTTGAGGCTGCAAACAGCTGCTGCAGCCGAG

Function

NR:

description
LOC562179 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_11241496_11246081.mRNA False 623 mRNA 0.52 4 11241496 11246081

Neighbor

gene id symbol gene type direction distance location
CI01000026_11239339_11240254 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding upstream 1063 11239339 ~ 11240433 (+)
CI01000026_11203781_11212074 NA coding upstream 28914 11203781 ~ 11212582 (+)
CI01000026_11075931_11078249 MDK, MDKA coding upstream 163040 11075784 ~ 11079080 (+)
CI01000026_11032284_11063044 NA coding upstream 177871 11031679 ~ 11063625 (+)
CI01000026_11012960_11021926 NA coding upstream 219570 11011340 ~ 11021926 (+)
CI01000026_11262923_11264188 TNNI2A.4, TNNI2B.2, TNNI2B.1 coding downstream 15000 11261081 ~ 11264534 (+)
CI01000026_11266022_11278889 NA coding downstream 19941 11266022 ~ 11278899 (+)
CI01000026_11298219_11305000 NA coding downstream 52138 11298219 ~ 11305013 (+)
CI01000026_11403059_11415298 PTPN5 coding downstream 156978 11403059 ~ 11415512 (+)
CI01000026_11436071_11446054 KIAA0232 coding downstream 189420 11435501 ~ 11446322 (+)
G133491 NA non-coding upstream 47671 11193361 ~ 11193825 (+)
G133454 NA non-coding upstream 88099 11144309 ~ 11153397 (+)
G133444 NA non-coding upstream 120746 11120509 ~ 11120750 (+)
G133443 NA non-coding upstream 121619 11119648 ~ 11119877 (+)
G133442 NA non-coding upstream 122474 11118711 ~ 11119022 (+)
G133501 NA non-coding downstream 9928 11256009 ~ 11256267 (+)
G133514 NA non-coding downstream 74784 11320865 ~ 11321130 (+)
G133515 NA non-coding downstream 75174 11321255 ~ 11321553 (+)
G133516 NA non-coding downstream 75723 11321804 ~ 11324137 (+)
G133519 NA non-coding downstream 85985 11332066 ~ 11332275 (+)
G133192 NA other upstream 1079535 10159819 ~ 10161961 (+)
G132667 NA other upstream 1672336 9568739 ~ 9569160 (+)
G131077 NA other upstream 2734709 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2942082 8297857 ~ 8307629 (+)
G133542 NA other downstream 230036 11476117 ~ 11477544 (+)

Expression


Co-expression Network