XLOC_000849 (si:dkey-222h21.10)


Basic Information

Item Value
gene id XLOC_000849
gene name si:dkey-222h21.10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 58312187 ~ 58466934 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001347
ATTCACCTCCTGAATcaagctgtgtgtctatgaagagtgattGGTCCATGGTGTATCCTCCTGACCTCAGTGATGGATCGGTGACCTCTGACCCCAACATCAGCAAGAGAAAGGGACAGCGTTTACAGTCTAAAGAGTCCAGCTGTGTGTCTGTAAAGAGTAACCGATCCATCACCCCACCTGAAAACTTTAGAGATGAACCAGCAACCTCCGACTTCAGGTGGAAGAAAGAAATTGGAGTTAAATCAGAGGATAATATGTTACAGAAAATTAAAaaccagcacaaaaccagcatgaagaacaaatatgagagattatttgagggaaacACACTCCAAGAGAACCAAACCCTCCTGAACCGGATCTACACCCAGCTGTACATCATAgagggagagagtgaaggagtgaatgaagaacatgaggttttacagatggagaaaacagCCAGAACAAAACACTCCCAACACACTCCaatctactgcaatgacatctttaaagagGAGAAAGAGCAAATCAAGACTGTTCttactaaaggcatcgctggaatcggaaaaaccgtctctgtgcagaagttcattctggactgggccgagggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatcagagatcatcagtacagtcttcacacacttctgctggactttcatcctgaacttgaagatctgaagcccaagatttatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttcagACGCTCAGAAAGTTTGTGATGTGACTGAgacttcatcagtggctgtgttgatgtcaAAGCTGATGAAAGGAgagctgcttccctctgctctcatctggatcacctccagaccagcagcagccaatcagatcccctccaaatacatcaagcgtctgacagaaattcagggattcactgagcctcagaaggaggaatatttcaggaagagaatcagtgagcagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatgtgccacatacccgtcttctgctggatctcatccactgtgcttcagaagctcctggaagaagatctgagtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcagaccAACATGAGGaatcagaagtatgaagagagagatccagagaaactcctgcagtccaacagagaaGTGATtgtcaaacttgctgaagtggctttcagacagctgatgaagggcaatgtgatgttctatgaggaggacctgattgagagcggcgtAGACGTCTTTGACgcctcagtgtattctgggatttgcactgagatctttaaggaggaatctgtgattcagaagaggaaagtctacagcttcaccCATCTCAGCATTCAGGAGTTCCTCGCTGCTTTCCATGTGTTTTACTACCACATAACCTGCTCCACAGAGGCATGTTTTGATTCACTGCATGATTTACAAAGAAGAGCAGTAGATAAAGCCATTGAGAGTGAGAATGGGCgtctggatctgttcctgcggttcctgctgggcgtctcattggagtccaatcagagactcttccaggatctactgacacacacagagaagagctcagagagcatcaggagaagcacacagtacattaaagagaAGATCAGAGATGGACATGGACTCTCcactgaaagatccatcaatctgttcctctgtctgctggaagtgaaagatcagactctgtccagagagattcaggagtttgtgaaatcagacaaacagtcagagaagaaactctctcctgctcactgctcaacaatcgcCTACATGCTTCAGATGTCAAAGGAGGTGCTGGATGAGCTGGAGCTCCAGAAATACAACACATCAGATGAGGGCAGGAAAAGACTGATACCAGCCGTCAGCAACTGCACAAGAGCTCTTCTTGCTGGCTGTAATCTCTCTGCTCAGGATTGTGAAATTGTGTCGTCAGTTcttcaatcctcaaactgtgtcctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgatggactgaagagtccaaactgtcAGCTGGAGATACTGAGgttgtctggctgtatggtgacagaggaaggctgtggttttctatcATCAGCTCTgagttcaaacccctcacacctgagagagctggatctgagctacaatcacccAGGACAATCAGGAGTCCAGCTGCTCCAACACACACAGGAGGATCCACACTACACACTGcagaaactcaaTTTGGACCATGGAGGACATTTCAGGATCACATCTGGATTGAGAAAATATGCCTGTTTTCTCACACTGGATCCAATCACAGCACATACTCAGCTCCagctgtctgaggagaacaggaAAGCAAGTATTGTGACAGATcctcagccgtatcctgatcatccagacagatttgatcaaCAGGAGCAGGTTCTGTGTAGAGAGACTCTgactggacgctgttactgggaggtaAAATGGAGCGGCTCTGGTCTTGTAGCGGTGACTTATAAAGGAATTGGCAGGAAAAGTGGATTTGACTGTTGTTTTGGACATAATGAACACTCCTGGTGTCTTTACTGCAGTGATGAGGTTTACTCTGTCTGGGACAATAATAAGAGCGTTGATGTATTTGGTCCTTCATCTCGTACTAATAGAGTAGGAGTGTATGTGGACGTGCCGTCCGGCTGTCTGTCTTTCTACAGTGTCtctgacacaaacacactcacacacatacacacattcaacaTCGCATTCACTGAAGAGCTCTATGCTGGATTTAAGGTTTATCCTGGATCTTCGGTGTCTCTGTGTCCTGTTGAACCTGCTGAAGTTCCTCCCTAAGTTCCAACCTAACCCCAAAACCCCAATTATACACAAAACCAC
>TCONS_00001348
GATTTAattgtgtgaatttttttttttttaatttgtgtccTGTCAGCATCAGCAAGAGAAAGGGACAGCGTTTACAGTCTAAAGAGTCCAGCTGTGTGTCTGTAAAGAGTAACCGATCCATCACCCCACCTGAAAACTTTAGAGATGAACCAGCAACCTCCGACTTCAGGTGGAAGAAAGAAATTGGAGTTAAATCAGAGGATAATATGTTACAGAAAATTAAAaaccagcacaaaaccagcatgaagaacaaatatgagagattatttgagggaaacACACTCCAAGAGAACCAAACCCTCCTGAACCGGATCTACACCCAGCTGTACATCATAgagggagagagtgaaggagtgaatgaagaacatgaggttttacagatggagaaaacagCCAGAACAAAACACTCCCAACACACTCCaatctactgcaatgacatctttaaagagGAGAAAGAGCAAATCAAGACTGTTCttactaaaggcatcgctggaatcggaaaaaccgtctctgtgcagaagttcattctggactgggccgagggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatcagagatcatcagtacagtcttcacacacttctgctggactttcatcctgaacttgaagatctgaagcccaagatttatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttcagACGCTCAGAAAGTTTGTGATGTGACTGAgacttcatcagtggctgtgttgatgtcaAAGCTGATGAAAGGAgagctgcttccctctgctctcatctggatcacctccagaccagcagcagccaatcagatcccctccaaatacatcaagcgtctgacagaaattcagggattcactgagcctcagaaggaggaatatttcaggaagagaatcagtgagcagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatgtgccacatacccgtcttctgctggatctcatccactgtgcttcagaagctcctggaagaagatctgagtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcagaccAACATGAGGaatcagaagtatgaagagagagatccagagaaactcctgcagtccaacagagaaGTGATtgtcaaacttgctgaagtggctttcagacagctgatgaagggcaatgtgatgttctatgaggaggacctgattgagagcggcgtAGACGTCTTTGACgcctcagtgtattctgggatttgcactgagatctttaaggaggaatctgtgattcagaagaggaaagtctacagcttcaccCATCTCAGCATTCAGGAGTTCCTCGCTGCTTTCCATGTGTTTTACTACCACATAACCTGCTCCACAGAGGCATGTTTTGATTCACTGCATGATTTACAAAGAAGAGCAGTAGATAAAGCCATTGAGAGTGAGAATGGGCgtctggatctgttcctgcggttcctgctgggcgtctcattggagtccaatcagagactcttccaggatctactgacacacacagagaagagctcagagagcatcaggagaagcacacagtacattaaagagaAGATCAGAGATGGACATGGACTCTCcactgaaagatccatcaatctgttcctctgtctgctggaagtgaaagatcagactctgtccagagagattcaggagtttgtgaaatcagacaaacagtcagagaagaaactctctcctgctcactgctcaacaatcgcCTACATGCTTCAGATGTCAAAGGAGGTGCTGGATGAGCTGGAGCTCCAGAAATACAACACATCAGATGAGGGCAGGAAAAGACTGATACCAGCCGTCAGCAACTGCACAAGAGCTCTTCTTGCTGGCTGTAATCTCTCTGCTCAGGATTGTGAAATTGTGTCGTCAGTTcttcaatcctcaaactgtgtcctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgctggactgaagagtccaaactgtcagctggagatactgaggtattaagaataaataaaagagaGAATTATGTCAATATCTGAAGATGATCCATCTGTTTGTGCATTGGTGTGTGCaggttgtctggctgtatggtgacagaggaaggctgtggttttctatcttcagctctgagttcaaacccctcacacctgagagagctggatctgagctacaatcacccAGGACAATCAGGAGTCCAGCTGCTCCAACACACAATAGAGAAACTCAAGTAAGTGTGACAaaatcattcattgattcatttgtgAGCGTTTACGTGAGTTTTCAAACATTCATTATTATGCTTTGGAAGAATAATTTCTTCTTCTGAATAATGTGTATTTTCTAGTGTGGACAATGGAGGTGCTTTAAGAATCACACCAGGACTGAATAAATGTGGGTCCTCTCATACTTTGCATGGCTCTTACAGTTCTGAACAGCGctgtgaaatgtttttaatatgtttttgatcTCTCCTCTTGTGTTCAGATGCAGTAGatctcactctggatccaaacactgCAAACACTAACATCATCCTGTCTGAGGACAACAGAAAGGCAACATACACAGAAGAGCcacagccgtatcctgatcaccCAGAGAGATTTGTTGGTGGTGAACGGGTTCTGTGCCAAGAGAAACTAACTGGGCGCTGTTACTGGGAGGTGAAATGGAGTGGATGGGGTCATGCAGCGGTGACGTATAGAGgaatcaggaggaagggaggcaGCTACTGCAGGTTTGGGTACAATGACAAATCCTGGAGTCTGGATTACTCTGATGACAGATTCACTGTCTGGCACAATAAAAAGAGAATCGACATACCAGCCCTGTCACCCCAGTCCAATAGAGTAGGAGTGTATGTGGACGTGCCGTCAGGCTCTCTGTCCTTCTACAGcatctctgacacacacacactcacacacttacacacattcaACACCACATTCACTGAAGACCTCTATGCTGGGTTCAGAGTTTATGAGTCTGAACTGTCTTTGTGCCAGAGTACACCACACAGAGACAAATTTTAATTTAGCCTGTGATCATTTTTTTCTACAGAACTTTTGTAGGACTTTtctgttctgaaaaaaaaaattcatagacGCCTTGTTCTTAAAATAAACATATGTCTGTGAAAGATCCATCTTCTGCTGTTGT
>TCONS_00001360
GAGCTTTTATGCTGTCGACACTGGATTTTCAGTGGCTGCATATTCTCTGTAAAAGGAGGACAGAGACTTTACCATGAGTCTTAGTGTCAAGACAGAAGAGGACTCTGCCATTAAAATGAGTCCTGCATCTCCTGGatcaagctgtgtgtgtgtgaagagtgATCATTCAGTGTCACATCTGTCTCCAGGATTAAGTGATGCAACAGTGACCTCTGAACTCAGTAGAAACAGATCAGAGCCTCCAGAACCCAGTGGTATGTCTGTGAAGAGTAACACATCCATGATTGCAGGAGTCAGCTTCAGTGATAAACACTTGATCTCTGACTTTAGGCTgaatgacacaaagagacaaacTAGAGACAAACCAAAGGTTAATAAACTACAGAGAATTAAAGACCAACACAAAGCCATCATGAAGAGCAAATATGAGAGTTTATTCGAGGGGATCAAACTCCTGAAGAACCAAACCCTCCTGAACCAGATCTACACCCAGCTGTACATCATAgagggagagagtgaaggagtgaatgaagaacatgaggttttacagatggagaaaacagCCAGAACAAAACACTCCCAACACACTCCaatctactgcaatgacatctttaaagagGAGAAAGAGCAAATCAAGACTGTTCttactaaaggcatcgctggaatcggaaAAACcctctctgtgcagaagttcattctggactgggccgagggaaaaaccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatcagagatcatcagtacagtcttcacacacttctgctggactttcatcctgaacttgaagatctggagcccaagatttatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttcagACGCTCAGAAAGTTTGTGATGTGACTGAgacttcatcagtggctgtgttgatgtcaAAGCTGATGAAAGGAgagctgcttccctctgctctcatctggatcacctccagaccagcagcagccaatcagatcccctccaaatacatcaagcgtctgacagaaattcagggattcactgagcctcagaaggaggaatatttcaggaagagaatcagtgagcagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatgtgccacatacccgtcttctgctggatctcatccactgtgcttcagaagctcctggaagaagatctgagtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcagatcaacatgaggaatcagaagtatgaagagagagatccagagaaactcctgcagtccaacagagaaGTGATtgtcaaacttgctgaagtggctttcagacagctgatgaagggcaatgtgatgttctatgaggaggacctgactGAGAGCGGCGTAGACGTCTCTGAAgcctcagtgtattctgggatttgcactgagatctttaaggaggaatctgtgattcagcagaggaaagtctacagcttcatccatctgaGTGTTCAGGAGTTCCTCGCTGCTTTCtatgtgttttattatttcataagcCACACCACAGAGCCATTTTTAGATTCATTGCATAATTTACATAAGAGAGCAGTAGATAAATCCATTGAGAGTGAGAATGGGCgtctggatctgttcctgcggttcctgctgggcgtctcactggagtccaatcagagactcttccaggatctactgacacacacagagaagagctcagagagcatcaggagaagcacacagtacattaaagagaAGATCAGAGATGGACATGGACTCTCcactgaaagatccatcaatctgttcctctgtctgctggaagtgaaagatcagactctgtccagagagattcaggagtttgtgaaatcagacaaacagtcagagaagaaactctctcctgctcactgctcaacaatcgcCTACATGCTTCAGATGTCAGAGGAGGTGCTGGATGAGCTGGAGCTCCAGAAATACAACACATCAGATGAGGGCAGAAGAAGACTGATACCAGCCGTCAGCAACTGCACAAGAGCTCTTCTTGCTGGCTGTAATCTCTCTGCTCAGGATTGTGAAATTGTGTCGTCAGTTcttcaatcctcaaactgtgtcctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgctggactgaagagtccaaactgtcagctggagatactgaggttgtctggctgtatggtgacagaggaaggctgtggttttctatcttcagctctgagttcaaacccctcacacctgagagagctggatctgagctacaatcacccAGGACAATCAGGAGTCCAGCTGCTCCAACACACAATAGAGAAACTCAATGTGGACAATGGAGGTGCTTTAAGAATCACACCAGGACTGAATAAATATGCAGTAGatctcactctggatccaaacactgCAAACACTAACATCATCCTGTCTGAGGACAACAGAAAGGCAACATACACAGAAGAGCcacagccgtatcctgatcaccCAGAGAGATTTGTTGGTGGTGAACGGGTTCTGTGCCAAGAGAAACTAACTGGGCGCTGTTACTGGGAGGTGAAATGGAGTGGATGGGGTCATGCAGCGGTGACGTATAGAGgaatcaggaggaagggaggcaGCTACTGCAGGTTTGGGTACAATGACAAATCCTGGAGTCTGGATTACTCTGATGACAGATTCACTGTCTGGCACAATAAAAAGAGAATCGACATACCAGCCCTGTCACCCCAGTCCAATAGAGTAGGAGTGTATGTGGACGTGCCGTCAGGCTCTCTGTCCTTCTACAGcatctctgacacacacacactcacacacttacacacattcaACACCACATTCACTGAAGACCTCTATGCTGGGTTCAGAGTTTATGAGTCTGAACTGTCTTTGTGCCAGAGTACACCACACAGAGACAAATTTTAA

Function

symbol description
si:dkey-222h21.10 Predicted to be involved in intracellular signal transduction.

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081031-22 Predicted to be involved in intracellular signal transduction.

Ensembl:

ensembl_id ENSDARG00000094246 ENSDARG00000104415

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001347 False 2990 mRNA 0.46 6 58312187 58316953
TCONS_00001348 False 3287 mRNA 0.44 2 58312680 58466934
TCONS_00001360 True 3043 mRNA 0.46 7 58461990 58466807

Neighbor

gene id symbol gene type direction distance location
XLOC_000848 si:dkey-222h21.2 coding upstream 2669 58303892 ~ 58309518 (+)
XLOC_000847 si:dkey-222h21.6 coding upstream 14542 58290933 ~ 58297645 (+)
XLOC_000846 si:dkey-222h21.7 coding upstream 26712 58282449 ~ 58285475 (+)
XLOC_000845 si:dkey-222h21.8 coding upstream 43956 58260886 ~ 58268231 (+)
XLOC_000844 ggt1l2.2 coding upstream 54288 58242498 ~ 58257899 (+)
XLOC_000861 si:ch73-236c18.7 coding downstream 3353 58470287 ~ 58475718 (+)
XLOC_000862 si:ch73-236c18.9 coding downstream 41856 58508790 ~ 58530485 (+)
XLOC_000863 zgc:172091 coding downstream 68372 58535306 ~ 58537356 (+)
XLOC_000864 NA coding downstream 110985 58577919 ~ 58585132 (+)
XLOC_000865 NA coding downstream 119419 58586353 ~ 58595767 (+)
XLOC_000837 BX927298.1 non-coding upstream 138598 58160151 ~ 58173589 (+)
XLOC_000829 BX469930.2 non-coding upstream 294823 58003615 ~ 58017364 (+)
XLOC_000826 NA non-coding upstream 380595 57926893 ~ 57931592 (+)
XLOC_000822 NA non-coding upstream 569751 57742079 ~ 57742436 (+)
XLOC_000819 NA non-coding upstream 599951 57710298 ~ 57712236 (+)
XLOC_000871 NA non-coding downstream 179751 58646685 ~ 58669075 (+)
XLOC_000874 NA non-coding downstream 311119 58778053 ~ 58782292 (+)
XLOC_000876 NA non-coding downstream 386236 58853170 ~ 58854377 (+)

Expression


Co-expression Network