XLOC_000857 (si:ch73-59p9.2)


Basic Information

Item Value
gene id XLOC_000857
gene name si:ch73-59p9.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 58400409 ~ 58415954 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001356
AGACGTCTAAAATCCTCTAGGTTTCAGCTGTGGTTACGAGATCTCTTGGACTATAAAAACACTGaTTAACAAGCccagttcagttttgtatgtaaaCATGAAAAGCAGATTTGGATATCAGGAAATTAAGCCTTATGGGACTTTACCGGGTCGCTTGGATGGTTTTAGAAgGTACATGGTCATTGCTTTTTTAATTGCAGTAGTTTTGTTTTTGACGCTGACTCAGAGATCTGCTGTGACACACATTCCACGTCCTGCACCCATTGGTTATTGCTATTGTAAAGCAGCAGTGGTAACAGATGCAGAAACTTGCTCAGTGATCGGAAGGGATATCCTGAAGCGCGGGGGTTCAGCAGTGGATGCTGCCATTGCAGCTctgctgtgtgtgagtgtgattaaCCCTCAGAGTATGGGCATCGGTGGAGGACTGGTGTTTACCATATACAATGCTTCGAATGGAAAGGTGGAGACAATCAATGCTCGAGAGACTGCCCCAATGAGTGCTACAGCAAACATGTTTGACAATGATCCTCAAAAAAAGTATCCAGGATTATTAATAGCTGTACCAGGAGAACTGCGTGGTTATGAAATGGCACACAAAAGGTATGGGAAACTGCCATGGAAAGATCTGTTTGTGCCCAGTATAAAGCTGGCATCGGAGGGATTTAAGATTGGCAAAGCCCTGGCCAATGCCATCAATgatgaaaaagagaaaattctGAAAAATGCAGCATTGCGTGAAGTGTTTTGTGACTCACACAATACCACCTTGAAGGAAAATGATACTATAAGTTTTCCCCAACTTGCTGCCACCTACTGGAAGATAGCAAAAAATGGAGCAAATGCATTTTACAATGGGTCCCTGGCTCAGACTCTAGTGAATGACATCAATGCTGCAGGGGGAAATATCACACTTCAAGACCTAAAGGATTATAAACCAGAGTTGATAGAGTCTGCATTGAACTTTACAGTGGGGAAATACACATTCTATGCTCCTACTGCTCCATTCGGTGGACCTGTGCTCGCTCTGATAATGAAAATACTCCTGGGTTTTGGCTTCTCAAAGAAAAGTGTGTCCACACCAGAGAATATGACTTTGACCTATCATCGCATCATAGAGGCTTTCTGCTTATCTACTGCCTTGAAGAATAATCTGTCTGACCCACGTTATGATAAAAGTGTCACTGAGTTAATCAAAAACATGACTTCAGACAGCTTTGCGGACGACGCCAGGAGGAAGATTAAAGATAACATTGCAACCGCCTGCAACAAGCTGCTGGATGACAATGATGACAATGGCACATCTCACGTGTCTGTCCTTGATAAAGACGGCTATGCAGTGGCGGTGACCAGCAGCATCAATAACTATTTCGGTTCTGGTGTGATGTCAGGCTGTTcaggcatcatatttaatgaccaGATGTCAGATTTCATTCAGATGAAGAGTGAACGCAACAAAATTGAAGGAGGTAAGAGACCACTGTCATCAATGTGTCCCACAATAATACTGGGCAAATCCAAAGGAAAAGGGGGGAAAGTGAGAATGGTGGTTGGAGCTGAAGGAGGGACGAACATCACCACATCTGTTGTTCAGGTGATCCTGAACTACCTGTACTTTGGCTATTATCTGAAGACAGCTGTTGATCAACCCAGATTTCACATCACACCAAATGGGACATATGTGGATGATAACTTTGATGAGAGTGATTAAAGGCTTGGAGGAGAAGAATCATACTATTATACGTAACGATACTGAAGATTCAGTGGTTCAGGCGATTGGACGAGAATGCACCAAAATCTGTGCTGCATCTGACTTCAGGAAATATGGCAAACCTGCTGGATACTGACCGCTGCTTCTGCGTTCA

Function

symbol description
si:ch73-59p9.2 Predicted to enable glutathione hydrolase activity. Predicted to act upstream of or within glutathione catabolic process.

GO:

id name namespace
GO:0006751 glutathione catabolic process biological_process
GO:0036374 glutathione hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-48 Predicted to enable glutathione hydrolase activity. Predicted to act upstream of or within glutathione catabolic process.

Ensembl:

ensembl_id ENSDARG00000091254

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001356 True 1865 mRNA 0.43 14 58400409 58415954

Neighbor

gene id symbol gene type direction distance location
XLOC_000856 si:ch73-236c18.2 coding upstream 3129 58393630 ~ 58397280 (+)
XLOC_000855 CU914631.1 coding upstream 14281 58375871 ~ 58386128 (+)
XLOC_000854 slc27a1b coding upstream 28906 58370526 ~ 58371503 (+)
XLOC_000853 si:dkey-222h21.1 coding upstream 33237 58360935 ~ 58367172 (+)
XLOC_000852 si:dkey-222h21.2 coding upstream 42417 58353661 ~ 58357992 (+)
XLOC_000858 si:ch73-236c18.3 coding downstream 8553 58424507 ~ 58434252 (+)
XLOC_000859 zgc:194906 coding downstream 26740 58442694 ~ 58451271 (+)
XLOC_000860 si:ch73-236c18.5 coding downstream 40540 58456494 ~ 58459867 (+)
XLOC_000861 si:ch73-236c18.7 coding downstream 54333 58470287 ~ 58475718 (+)
XLOC_000862 si:ch73-236c18.9 coding downstream 92836 58508790 ~ 58530485 (+)
XLOC_000837 BX927298.1 non-coding upstream 226820 58160151 ~ 58173589 (+)
XLOC_000829 BX469930.2 non-coding upstream 383045 58003615 ~ 58017364 (+)
XLOC_000826 NA non-coding upstream 468817 57926893 ~ 57931592 (+)
XLOC_000822 NA non-coding upstream 657973 57742079 ~ 57742436 (+)
XLOC_000819 NA non-coding upstream 688173 57710298 ~ 57712236 (+)
XLOC_000864 NA non-coding downstream 161965 58577919 ~ 58585132 (+)
XLOC_000865 NA non-coding downstream 170399 58586353 ~ 58595767 (+)
XLOC_000871 NA non-coding downstream 230731 58646685 ~ 58669075 (+)
XLOC_000874 NA non-coding downstream 362099 58778053 ~ 58782292 (+)
XLOC_000876 NA non-coding downstream 437216 58853170 ~ 58854377 (+)

Expression


Co-expression Network