G143230


Basic Information

Item Value
gene id G143230
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 10090699 ~ 10090928 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162733
GATTTTTAAATATTTTGGCGGCCTCGTCGCGCCTGTATGACCCGCGGGGATTTAAAGCACCGGCATTCTGTCCATACTGCTGTAAGGTAATGACATCGGCTAGCACATTGATTTCTCCTGCATGCCTATAAGTTGGCACCAAGAAGACCTGCTTGTTTTGTGTTTAGTCGAGACCTTAACAATAAGCAGGATGGCATAAGCCTAGCTTTTTGTATTTAGGTGTAGGCGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162733 True 230 lncRNA 0.45 1 10090699 10090928

Neighbor

gene id symbol gene type direction distance location
CI01000027_10072946_10084310 RHBDL2 coding upstream 6133 10072437 ~ 10084566 (+)
CI01000027_10055186_10067131 AKIRIN1 coding upstream 23568 10055186 ~ 10067131 (+)
CI01000027_10048220_10051640 NA coding upstream 38955 10048127 ~ 10051744 (+)
CI01000027_09958003_09959274 NA coding upstream 130437 9955825 ~ 9960262 (+)
CI01000027_09931428_09937694 NA coding upstream 152947 9929615 ~ 9937752 (+)
CI01000027_10098742_10105152 RRAGC.S, RRAGCA, RRAGCB, RRAGC coding downstream 7784 10098712 ~ 10105308 (+)
CI01000027_10368925_10370031 POU3F1, POU3F1.L, POU3F1.S coding downstream 277479 10368407 ~ 10371305 (+)
CI01000027_10408345_10410012 NA coding downstream 315168 10406096 ~ 10410362 (+)
CI01000027_10437783_10448105 FHL3, FHL3A, FHL3.S coding downstream 346855 10437783 ~ 10448355 (+)
CI01000027_10526694_10541815 GNL2 coding downstream 435766 10526694 ~ 10542130 (+)
G143195 NA non-coding upstream 46625 10040906 ~ 10044074 (+)
G143205 NA non-coding upstream 77350 10011873 ~ 10013349 (+)
G143159 NA non-coding upstream 192647 9896693 ~ 9898052 (+)
G143156 NA non-coding upstream 225594 9864631 ~ 9865105 (+)
G143034 NA non-coding upstream 380439 9701004 ~ 9710260 (+)
G143237 NA non-coding downstream 16468 10107396 ~ 10107823 (+)
G143240 NA non-coding downstream 17539 10108467 ~ 10108834 (+)
G143244 NA non-coding downstream 23026 10113954 ~ 10114160 (+)
G143246 NA non-coding downstream 23846 10114774 ~ 10115011 (+)
G143252 NA non-coding downstream 41543 10132471 ~ 10132670 (+)
G143033 NA other upstream 361148 9728815 ~ 9729551 (+)
CI01000027_08255251_08264629 NA other upstream 1829873 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 2058658 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 2138757 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 2618985 7468964 ~ 7471999 (+)

Expression


Co-expression Network