G143252


Basic Information

Item Value
gene id G143252
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 10132471 ~ 10132670 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162761
GAGCTCTTCGCATTGCAAGTACAATTCTGTACCAGCTGAACTATCGAGCAAGCTTGTTATGTCAGTAAAACTGAACATCTGGAGCTGGGTGAGTGATGCAAACTCCAAAATATAATTTGTTTACAAATCATGCACTATGGTAAAAAGTGTTTTGAGGTCATAACATTATTGTGCAAGGTGCCTCGTGAAAACAAGTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162761 True 200 lncRNA 0.39 1 10132471 10132670

Neighbor

gene id symbol gene type direction distance location
CI01000027_10098742_10105152 RRAGC.S, RRAGCA, RRAGCB, RRAGC coding upstream 27163 10098712 ~ 10105308 (+)
CI01000027_10090545_10093306 CX55.5 coding upstream 38725 10090545 ~ 10093746 (+)
CI01000027_10072946_10084310 RHBDL2 coding upstream 47905 10072437 ~ 10084566 (+)
CI01000027_10055186_10067131 AKIRIN1 coding upstream 65340 10055186 ~ 10067131 (+)
CI01000027_10048220_10051640 NA coding upstream 80727 10048127 ~ 10051744 (+)
CI01000027_10368925_10370031 POU3F1, POU3F1.L, POU3F1.S coding downstream 235737 10368407 ~ 10371305 (+)
CI01000027_10408345_10410012 NA coding downstream 273426 10406096 ~ 10410362 (+)
CI01000027_10437783_10448105 FHL3, FHL3A, FHL3.S coding downstream 305113 10437783 ~ 10448355 (+)
CI01000027_10526694_10541815 GNL2 coding downstream 394024 10526694 ~ 10542130 (+)
CI01000027_10545286_10547348 NA coding downstream 412616 10545286 ~ 10547894 (+)
G143246 NA non-coding upstream 17460 10114774 ~ 10115011 (+)
G143244 NA non-coding upstream 18311 10113954 ~ 10114160 (+)
G143240 NA non-coding upstream 23637 10108467 ~ 10108834 (+)
G143237 NA non-coding upstream 24648 10107396 ~ 10107823 (+)
G143230 NA non-coding upstream 41543 10090699 ~ 10090928 (+)
G143258 NA non-coding downstream 17447 10150117 ~ 10150364 (+)
G144020 NA non-coding downstream 48663 10181333 ~ 10181537 (+)
G144029 NA non-coding downstream 59788 10192458 ~ 10192661 (+)
G144121 NA non-coding downstream 246162 10378832 ~ 10379050 (+)
G144125 NA non-coding downstream 256212 10388882 ~ 10389100 (+)
G143033 NA other upstream 402920 9728815 ~ 9729551 (+)
CI01000027_08255251_08264629 NA other upstream 1871645 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 2100430 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 2180529 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 2660757 7468964 ~ 7471999 (+)

Expression


Co-expression Network