CI01000029_04485919_04510826 (MFSD2B)


Basic Information

Item Value
gene id CI01000029_04485919_04510826
gene name MFSD2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 4485919 ~ 4510826 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_04485919_04510826.mRNA
ATGGCCAAGGGGGAGAAAGCCCGGGTCACATCAGGGGATAAACTCATGATGAAGCACTCTGAACCTGCTTTCACCAAGGTACCACCACAGACTCATCTGGATCAGAAGCTCACTGTATGTAGCAAACTATGCTTCGCCATCGGAGGGGCACCGAATCAGGTCGCCGGGAGCGCAACAGCTTTTTTCCTTCAGATATATCTACTTGACATTGCACAGATTAACCCGTTCCAGGCCTCCATGGTGTTGTTCGTCGGTAAGGCTTGGGGGGCAGTTACTGACCCCATTGTGGGATTCTTCATTACTAAGAGTAAATGGACAAAGATTGGACGACTCATGCCATGTTGTTTATCCTCTGTGAAAGTGAAAAGCAGTGTGGCACAGAGGATGGTGGGCTGCACTCCATTTGTGGTGGTCTCTTACTTTTACCTTTGGTTTGTTCCACCTTTTACCAATGGGAGGTTCATCTGGTATCTGGGCTTCTACTGTCTCTACCAAACTCTCATCACATGTTTCCATGTGCCTTATTCCGCCCTGACCATGTTCTTGAGCACCGACCAGCGAGAGAGAGACTCTGCTACAGCTTACCGTATGACGGTGGAGGTGCTTGGTACGCTGGTCGGTGCCGCCATTCAGGGTCAGATTGTAGCGAGCGCACACACACTGAAGCACTGTCCGCATCGGAACCTGACGACTGGTCACCTGGGAAACAGCAGCGGAACAGAGATCATCAGATCCCTGGCGCTATCACAGGACTTCCTGTCTCATGCTAAGGAAGTGTACATGATAGCTGCCGGAGTGATCGGAGGGCTGTTTCTGGTTTGTACAGTGGTCATGTTTCTGGGAGTCAAAGAGAGAGATGATCCCTACGCTCCTAAAACGGACAAAGCCATTCCTTTCCATAAGGGCTTTATTTTGGTCATGAAGCACGGGTCTTACCTCACTCTGACGGCAGCTTTCCTTTTCATTTCTGTGGCCATTCAGATGATACAAAGTAACTTTGTGCTGTTCTGCACGTATGCGGTGGAACTTCGTGATCACTTTCAGAACATTGTTTTGACTATTCTGTGGATCATGCCGTTCACGGTGATGCTGGTGTTCATCCCTAATCTGATAGTGGCATATGTTGTGGCCGTATCGTCTGGGCTTAGTGTGGCTGCTTCTCTCTTGTTACCATGGTCAATGTTACCAGATGTAGTGGATGACTTCAGACTGGCAAACCGCAACTCAAAGGGACACGAGGCAATCTTCTACTCCCTATATGCTTTCTTCACAAAGTTTGCTGCAGGCATTTCTCTTGGAGTGTCCACGCTCTGTCTACAGTTTGCTGGTTATGACACAGGAGCGTGCAGACAGCCCCCTCCAGTGGTCTACACGCTGAAATTGCTCATCGGTGCTGCTCCGGTGGTCTGTATCACCACAGGCCTTATGATCCTCGTGGTGTACCCCATTAGTGAGGACGTCAGATTACGAAACAAATTTGCCCTGGAAGAGCTCAG

Function

symbol description
mfsd2b Predicted to enable sphingolipid transporter activity. Predicted to be involved in organic substance transport. Predicted to act upstream of or within carbohydrate transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human MFSD2B (major facilitator superfamily domain containing 2B).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_04485919_04510826.mRNA True 1496 mRNA 0.50 13 4485919 4510826

Neighbor

gene id symbol gene type direction distance location
CI01000029_04460778_04463540 FKBP1B coding downstream 22379 4460159 ~ 4463540 (-)
CI01000029_04433110_04458444 MUT coding downstream 27475 4433054 ~ 4458444 (-)
CI01000029_04272476_04278373 RUNX2A, RUNX2 coding downstream 206938 4271586 ~ 4278981 (-)
CI01000029_04246988_04247383 RUNX2B coding downstream 236868 4245107 ~ 4249051 (-)
CI01000029_04144327_04203475 MARK3B, MARK3 coding downstream 282444 4144327 ~ 4203475 (-)
CI01000029_04514094_04517849 UBXN2A coding upstream 3024 4513850 ~ 4517849 (-)
CI01000029_04577893_04580321 NA coding upstream 66857 4577683 ~ 4580974 (-)
CI01000029_04611378_04794476 KLHL29 coding upstream 100552 4611378 ~ 4794476 (-)
CI01000029_04881932_04882348 NA coding upstream 371019 4881845 ~ 4883735 (-)
CI01000029_04898116_04905715 TRIB2 coding upstream 386798 4897624 ~ 4905811 (-)
G154209 NA non-coding downstream 58951 4424924 ~ 4426968 (-)
G154239 NA non-coding downstream 76423 4409278 ~ 4409496 (-)
G154238 NA non-coding downstream 77120 4408581 ~ 4408799 (-)
G154234 NA non-coding downstream 82858 4402831 ~ 4403061 (-)
G154198 NA non-coding downstream 90169 4395419 ~ 4395750 (-)
G154229 NA non-coding upstream 13188 4524014 ~ 4529646 (-)
G154216 NA non-coding upstream 155529 4666355 ~ 4722192 (-)
G154230 NA non-coding upstream 165996 4676822 ~ 4682438 (-)
G154224 NA non-coding upstream 181130 4691956 ~ 4694050 (-)
G154221 NA non-coding upstream 242172 4752998 ~ 4757552 (-)
CI01000029_03698769_03707177 NA other downstream 778667 3698572 ~ 3707883 (-)
G153891 NA other downstream 1199365 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 1893117 2587549 ~ 2592379 (-)
CI01000029_01293143_01293964 BATF3 other downstream 3191796 1292249 ~ 1294123 (-)
G154415 NA other upstream 475282 4986108 ~ 4990990 (-)
G156542 NA other upstream 2659541 7170367 ~ 7170951 (-)
G156495 NA other upstream 2855501 7365007 ~ 7371921 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018366 mfsd2b coding NC_007131.7 CM002904.2 44507667 ~ 44557037 (-)