G152451


Basic Information

Item Value
gene id G152451
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2761594 ~ 2762939 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU173161
TTGTTTTAAAAGTTTTATTTCAAATAAGTATATTGTCATTCTGCTCTCTGAACATCACTGACATCAGTTTACATTCAGAATACACATATCACTATAAATTTGTCTGTTTGTAACGGAAAATGTAGCTAATGGAAATGACAACATCAGACAAACTAGACATGTGGACACCAGTGCTCAAGTCACCTACTGACTCTTTGGTATATTTACACACAATATATACAATCATATAACAATAAGCATTTTTTTTACCTTAGTATATCAAAACTATCCAAGCCAAACATGTATTATGCACACAAAATGATCATAAAATAATTAAATACTTTCTCAAGCGTGTAAAATACTGGACAATTAGCTAAGGGCTTTGAAAAAAAAAAAAAACTATATAGATGTTTCTCTTAAAACTTGGCAGATTTGTTAAATTTCTGAGATACAAAAGTCCAAATCTAATGATCTTCCATCAATTGTTTTTCTTCTTTGGCCCCATCCAGGCTTCCTCCAAGACTCTGACCGCTCTCATACTGCTTGTTCATTTTGTTTTGCTTCAGAGCATTTTCCGAGGTCATCTCCCAGGAAGATGGCAAACTGGCGGGGTTTCTAGCCGAAGTGATATGTGTCCGTTTCTTGTTGGTCCGGCATCCCACCCTGGTGCACAGCAGGTAAAACACCTCTATGACATTCAGTAGCAGAGACACACAGGCTACCACTAGCATAAAGATGATGAAGATGGTCTTCTCTGTGGGACGGGACATGAAACATTCCACGGTGTAAGGACAAGGAGATTGGGAACATGTAAACTTGGCGATCATAATAAAGCCATATAAATAATACTGTCCAACAATGAATGCAATCTCGAAGATGATTTTAAAAAACAACTGGGTCAGATAGCTGCCGAGCAGGTTTCCTTTAATTTTGACGTGGCCAGTGTCATCTGTGTATTTGGGTGACTTCAACTTGTGACCATCGCCAAGTCTTTTAATCTTCTCCCTGAGTTTGTTCTCTTGGTGAATGACCTGCACCGCATGGCCGAGGTACACCAAAGTTGGAGTGGACACGAATATAATCTGCAAGACCCAGAAGCGGATGTGCGAGATGGGGAACTGCCAGTCGTAGCACACGTTGCAAACCAAACTAGATTGTTCATCACCCCAAACGCTCTCCGCCGCCGCTCCCAGCACCAGGATTCTGAAGATGAAAAGGACGCTCATCCATATTTTGCCAATGACAGTGGAGTGAGATTGCACTTTGTCTAATAACGCCGAGAGAAATCCCCAGTCTCCCATGTTTGCTGATGCT

Function

NR:

description
PREDICTED: rho guanine nucleotide exchange factor 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173161 True 1293 TUCP 0.41 3 2761594 2762939

Neighbor

gene id symbol gene type direction distance location
CI01000029_02750295_02751549 NA coding upstream 10036 2747982 ~ 2751558 (+)
CI01000029_02684591_02727897 NA coding upstream 33427 2682519 ~ 2728167 (+)
CI01000029_02583370_02587687 SERINC1.L, SERC1, SERINC1, SERINC1.S coding upstream 173897 2583370 ~ 2587697 (+)
CI01000029_02488613_02490983 NA coding upstream 270567 2488350 ~ 2491371 (+)
CI01000029_02445216_02480549 NA coding upstream 280930 2444973 ~ 2480664 (+)
CI01000029_02772065_02813214 TBC1D32 coding downstream 9126 2772065 ~ 2814491 (+)
CI01000029_02860076_02868432 NA coding downstream 95970 2858909 ~ 2868937 (+)
CI01000029_02904113_02950205 NA coding downstream 140841 2903780 ~ 2951323 (+)
CI01000029_02956475_02956765 NA coding downstream 192949 2955888 ~ 2970825 (+)
CI01000029_02976262_03013586 MAN1A1 coding downstream 213168 2976107 ~ 3013913 (+)
G152446 NA non-coding upstream 25543 2735816 ~ 2736051 (+)
G152433 NA non-coding upstream 136847 2624445 ~ 2624747 (+)
G152432 NA non-coding upstream 137685 2623482 ~ 2623909 (+)
G152426 NA non-coding upstream 147311 2613991 ~ 2614283 (+)
G152424 NA non-coding upstream 150840 2610530 ~ 2610754 (+)
G152465 NA non-coding downstream 138721 2901660 ~ 2992153 (+)
G152522 NA non-coding downstream 289556 3052495 ~ 3052730 (+)
G153405 NA non-coding downstream 380048 3142987 ~ 3184240 (+)
G153423 NA non-coding downstream 428654 3191593 ~ 3201635 (+)
CI01000029_01526863_01527414 NA other upstream 1233695 1526754 ~ 1527899 (+)
G151495 NA other upstream 2389672 366541 ~ 371922 (+)
G151415 NA other upstream 2536349 170521 ~ 225245 (+)
G153475 NA other downstream 782186 3545125 ~ 3562004 (+)
G153790 NA other downstream 1970650 4733589 ~ 4740107 (+)
G154587 NA other downstream 2508081 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2694302 5461497 ~ 5470346 (+)
G155079 NA other downstream 3519746 6282685 ~ 6288398 (+)

Expression


Co-expression Network