Gene
RNA
| Item | Value |
|---|---|
| gene id | G154140 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 4056737 ~ 4057258 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU175027 | True | 522 | lncRNA | 0.36 | 1 | 4056737 | 4057258 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_04017725_04032225 | EFR3BB, CCL33.2, EFR3B | coding | downstream | 24512 | 4017193 ~ 4032225 (-) |
| CI01000029_03988871_03998768 | NA | coding | downstream | 57969 | 3988590 ~ 3998768 (-) |
| CI01000029_03949550_03958610 | NA | coding | downstream | 97993 | 3949306 ~ 3958744 (-) |
| CI01000029_03942459_03946094 | NA | coding | downstream | 110643 | 3942436 ~ 3946094 (-) |
| CI01000029_03927561_03936968 | NA | coding | downstream | 119769 | 3927499 ~ 3936968 (-) |
| CI01000029_04071708_04075046 | NA | coding | upstream | 13466 | 4070724 ~ 4075299 (-) |
| CI01000029_04108560_04110587 | MIXL1 | coding | upstream | 51140 | 4108398 ~ 4110871 (-) |
| CI01000029_04115189_04121331 | NA | coding | upstream | 57905 | 4115163 ~ 4121331 (-) |
| CI01000029_04122433_04123725 | TTC32 | coding | upstream | 64950 | 4122208 ~ 4123725 (-) |
| CI01000029_04125071_04135324 | MATN3, MATN3A | coding | upstream | 67483 | 4124741 ~ 4135374 (-) |
| G154137 | NA | non-coding | downstream | 54262 | 4002176 ~ 4002475 (-) |
| G154057 | NA | non-coding | downstream | 316018 | 3736231 ~ 3740719 (-) |
| G154047 | NA | non-coding | downstream | 368267 | 3688227 ~ 3688470 (-) |
| G154046 | NA | non-coding | downstream | 368609 | 3687852 ~ 3688128 (-) |
| G154040 | NA | non-coding | downstream | 422194 | 3633985 ~ 3634543 (-) |
| G154144 | NA | non-coding | upstream | 4924 | 4062182 ~ 4062422 (-) |
| G154146 | NA | non-coding | upstream | 7314 | 4064572 ~ 4064850 (-) |
| G154147 | NA | non-coding | upstream | 11330 | 4068588 ~ 4068822 (-) |
| G154148 | NA | non-coding | upstream | 11995 | 4069253 ~ 4070441 (-) |
| CI01000029_03698769_03707177 | NA | other | downstream | 349485 | 3698572 ~ 3707883 (-) |
| G153891 | NA | other | downstream | 770183 | 3248777 ~ 3286554 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 1463935 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 2762614 | 1292249 ~ 1294123 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 403085 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 928850 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 3113109 | 7170367 ~ 7170951 (-) |
| G156495 | NA | other | upstream | 3309069 | 7365007 ~ 7371921 (-) |
