XLOC_008776 (zgc:85932)


Basic Information

Item Value
gene id XLOC_008776
gene name zgc:85932
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 43333121 ~ 43389953 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017433
CTTCACACCATCGACTCTTTGACAGTTTTGGCATTAGGTATTAGTTCAGTCGTGAATCTGCGCATTCATACTCAGAActtcagctcacacacacacacacagtggcacAACTCTGACAGAAGAACCGCGCGATGAGTCGAGCCCCGAGGCAGGAGATTTTCACGCACTCCTCCGGTGTGTCCGGAAATAAGAAGCCGCAGAGCACATACTCGAACCCACGGACCGGTCTGGGCGCCCCTGCACCACCGGTTCCCGCCACCGGGCTGTACGTGGACACCAGATTCCCGGTGCAGAACATGCCAGTTCAGAACGACCTAGTTTGGAGACGACCGAAGgAGATCTGTCTGTTTCCCCAGTTTATTGTGGATGGAGCCACTCGTATGGACATCTGCCAGGGAGTTTTGGGTGATTGCTGGTTCTTGTCTGCGATGGCGtctctttctctctatcctgCCCTTCTGGATCGTGTGGTTCCCGCAGGCCAGGGTTTTCAGCAGGGATACAACGGCTGCTTCTGCTTTCAGTTTTGGCAGTACGGCGAGTGGATAAGTGTGAAAATCGATGACCTTTTGCCGACATGCAACAATCAGCTGATCTACCTGCACTCCGCCAGCAGAGATGAGTTCTGGAGCGCGCTGCTGGAGAAAGCTTATGCCAAACTGAAGGGAGGTTACAGTGCTCTGAATATGGGTTTTCCTCACGAGGCAATGGTGGACATGACAGGTGGGATCACGGAGGTTTTCATGGTGGCGTCTCTGCCTCGGGCACTGGGTTCATTCCTGAGGTCTTTACTGGAGAAAGGAGCTCTGATCAACTGCGCAAACTCACAGggtcCCCTTGAGAAGAGTAATGAGTTTGGGATTTTGTTCAGACATGCCTATTCTGTGACCGCTCTGGAGACGGTAAAGAGCACTATTGGTCCAGTTCAGCTGGTGCGGATCAGGAACCCGTGGGGTAAAGCTGAGTGGGAAGGACCCTGGAGTGACAATAAAGGGATCGAGTGGCATATGGTGACCGCTGAAGAACAGCGGCGTGTGCAGAGAATCCAGCAGGAAGATGGAGAGTTCTGGATGTCTTTGGCAGATTTCAGACAAAACTTTGAGCTGATGGAGGTTTGTCACCTGAGTGAAGATACGTTAAGTGAAGGTGATGTGAAAAAGCCATGGAAATGTACATCTCATCACGGACAGTGGACTCCTCTGCAGGgttcaCCTCAGTATAATCTGACCCTGCTGGAGGAGGACGACGACCCCAGTGACCCTGAACTAACGTGTTCATTCCTGCTGGCGCTCATGCAGAAACACACTCGGCAGAGAGGAACGCTGCTCTCCATAGCACTGCACATATACAAGGCCCGTGATCATGGTGTCTCCTCCCGGGAGTCTCCGCTGCTCAGCTCCACTAAAGATCAGGGATTTCAGCAGCGGCCGGAGCTGGTGCTGCGCGGTCGCCTGGCACCCGGCCATTACATCATCATTCCTGCCATACAAGAGACCAATCAGAGCGGAGAATTCCTGCTCAGAGTCTTGACTGAGAAAGGAAACACAACCACagctgCCGAGAGAGCTGGAGTAGCCACAGACTCCCTTACACAGcCACTGTCTCCAAGACTTGCTGGCTTGCCGTCTACAAATGAAGCAAGAGATCTGTTTGTGAAACACTGTGCaaagGGCCCTTACTGTCGGCCTCTGGATCTCTATAACCTGCTGACCGAAGCCATCTCAAAGGGAGTCTTTGCAGGGAGCGAGAAGATGCTGAGTCTGGAGCACTGCAAGAGCTTCGTAGTGCTCATGGATAGCCAAGGAATGGGGCGACTCGACCTGACTGAGTTCCAGGCATTGTGGGACAAACTCAGGAAGTGGACGAGTATTTTTATCACGTTTGACAAAAACAAGAACCAGGCGCTGGATTATCTAGAAATCTCCCCCGCTCTTTCAGCAGCAGGCATAAAGGTGGACGAGTTCATCCTGCAGCTGATCAGCCTGCGCTACACGGAGCCAGACATGACCCTCAGTTTCCCAGGATTCCTCTTCCTGCTCATGAAACTGGACTGCATGATGCGCAAGTTTCAGTCCTTTGACGTGACGGGAACGGGAATGATTTCAGTGAACTGCAGACAGTTCCTGCACATGACGTTGTACAACTGATCCCGGAGCAGCGAGAAGCTCCACATCTGCTGTAACTGTaactgctgtatgtgtgtgtgcgtgtggtcaGTGCTGTAACACACGGACATGGCGAGGAGCAGCTACTGTAAATAACACACTGCACTGGGGAACACTGCAGGTTTAGTGTACTGCAGACAGTGGACGGGTGATTGCTgaataaacagatatttt
>TCONS_00019058
AGTTATTGCTTCCTGCACATGACGTTGTACAACTGATCCCGGAGCAGCGAGAAGCTCCACATCTGCTGTAACTGTaactgctgtatgtgtgtgtgcgtgtggtcaGTGCTGTAACACACGGACATGGCGAGGAGCAGCTACTGTAAATAACACACTGCACTGGGGAACACTGCAGGTTTAGTGTACTGCAGACAGTGGACGGGTGATTGCTgaataaacagatattttaaagaacatCAGCAAAattgatgtaatattt

Function

symbol description
zgc:85932 Predicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function
GO:0005509 calcium ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2460 Predicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000098239

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017433 False 2339 mRNA 0.52 20 43333121 43389922
TCONS_00019058 True 259 lncRNA 0.45 2 43389593 43389953

Neighbor

gene id symbol gene type direction distance location
XLOC_008775 NA coding upstream 124876 43203855 ~ 43208245 (+)
XLOC_008774 flj13639 coding upstream 134708 43166511 ~ 43198413 (+)
XLOC_008773 NA coding upstream 232722 43092822 ~ 43100399 (+)
XLOC_008772 acsl3a coding upstream 254579 42995051 ~ 43078542 (+)
XLOC_008771 NA coding upstream 341473 42991400 ~ 42991648 (+)
XLOC_008777 actn4 coding downstream 8364 43398317 ~ 43510872 (+)
XLOC_008778 tyr coding downstream 409305 43799258 ~ 43818697 (+)
XLOC_008779 CABZ01073033.1 coding downstream 439436 43829389 ~ 43829517 (+)
XLOC_008780 naalad2 coding downstream 516090 43906043 ~ 43942064 (+)
XLOC_008781 NA coding downstream 555767 43945720 ~ 43946407 (+)
XLOC_008463 BX663520.1 misc upstream 22080839 21252191 ~ 21252282 (+)
XLOC_008768 NA non-coding upstream 735731 42595624 ~ 42597390 (+)
XLOC_008765 BX322538.1 non-coding upstream 1018366 42314628 ~ 42314755 (+)
XLOC_008783 NA non-coding downstream 676198 44066151 ~ 44070403 (+)
XLOC_008795 NA non-coding downstream 1096310 44486263 ~ 44488525 (+)
XLOC_008796 NA non-coding downstream 1148195 44538148 ~ 44809977 (+)

Expression


Co-expression Network