XLOC_008774 (flj13639)


Basic Information

Item Value
gene id XLOC_008774
gene name flj13639
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 43166511 ~ 43198413 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017432
ATGTCTCTGTACCGGAACTCAGCATGGTTCCTCAAAGGACTCACCGAATTCACCAAGGGGGCGTTTCTGTCGGCGTCTAAAAACTTTGTAGAGAAAGACCTGGAGACGTCGATGGCGGGCCGATCCTTCATGATCACCGGAGCCAACAGCGGCATTGGGAAAGCAGCCGCCATGGCCATCGCCAAGAAAGGTGGTACAGTCCACATGGTCTGCAGGAACAAAGACAAGGCAGAGGAAGCCCGAGCCGAGATCGTCAAAGAGTCTGGAAACAAAGAGATCTATGTGCATATTCTGGATCTGTCCGAGACCAAGAAGGTGTGGGAGTTTGTAGAGTCTTTTAAGAAAAAGTACAAAACCCTCAACGTCCTGATCAATAATGCCGGCTGTATGATGACTAAAAGAGAAGTGAATGGTGAAGGTTTGGAGAAAAGCTTCGCTAGCAACTCTCTGGCGGTGTTCATCTTCATCAAGAGTCTGATTCCTCTGCTGGAGAAGAGTCCTGACCCACGTGTGATCACCGTCTCCTCTGGCGGAATGCTGGTGCAGAAACTGCGCACTGGAAACTTGCAGTCGCAGAGAGGCAGATACGACGGCACTATGGTGTACGCGCAGAACAAGAGGCAGCAGGTGGTGATGACGGAGCAGTTCGCTAAAGCTCATCCCAGCATCCACTTCTCTGTCATGCACCCTGGATGGGTCGACACGCCGACTATTGCGAATGCGATGCCTGATTTCCACAGCTCAATGAAGGAGCGTTTGAGGACACCAGAGCAAGGAGCAGATACAGTGGTGTGGCTCGCCGTGTCTGAAGCGGCTGCCAAAAACCCCAGCGGACGCTTCTATCAGGATCGGAAGATGGTGTCGGCTCATCTTCCTCTGGCTTGGACACACAGCTCACAGCTGGAAGATCAGAAATTCATGAGCGTCATGGAGGATCTGGCCAAGGGCTTCCAACCTCACTAAATACACTCGCATGAAAGAATCGCAGCACAAATAGATGttaaacactaacacacacatttGACCAGCATACATGCATTATTCTCACCTGTAAAAGCAGTGTGAATGTACTCACCGTGCCTCACCACCAATGTTTAGCTGTAGATTAAACATCCTCCAGATCTCTGAACGTTTGAAGGTGTGAACGACTGTTACGCTTAATAAATGCTTCAAAACATTCGTCTTTTACCACAGTGACTACTTCGTTTTTTAATATTATCGTACATTTCATTTCTCTCCAATCACTGGCCGCATCAGGCGCAGGAACGTTTCTTTTGACACCATGTGATCAatctcagccaatcacagtgaGCTCTCACTCTCACTGTGCCGGTGACTCCAACGAATCAGGTCAATCTGGTGGGAACCCGCTCTGACCGGAGTCacccagctgtcaatcactcactCAGCCAATCAAGTGGTGAAACTGACCGAACAGGACACTTCCTGCTGTTTGGGGGACAGTGATTGGACGATTCTTGGGTGGACTGACACCTGATGTTCCAGAGGAATGGGGaagtgatgtgtgtgttttttttttttaatcataatttatTCTCTAAATAATGAATGATTCCATTTCTACATATATCGATTGGgttattaatatttatgacaCGACTGTACTCTGATACTTTTTGgtcaaatgttaataaatgtcttTGAAAGCGTGTTAAATTCAGTGTTGATATATGTGGGAGTAAAAAGAAAATCTGCTAAAATGTGTGTAGGATATATACTGCAATACTTTGGtgtttattcaaattattttactTGTATACATTGAAAAATGTGCTAAGCATTTGCATTCATGTTTCTATTGCTAGTTTTGCAAGCCTGCACTGAATATTTGTAAGTCTATCGAGAAAGTATGATTTTtgagaaaaatgaaaaatcaagAAATACTCAAGAAGATCCATTTTTAAACCTATGACAAGTAGATTTTAGACattcaaacgaattagccacttattaataaaaaaaaatctacaagtAAAATAGTTACAAATTGCCTTAAACTGCTGGTATTTTGAGAACGCAAAAGCATTTCAATAAATTTGCCCCCAGGAAAACATTTGCATGTCTCCAAAAACTATGCATTTGCTCAAaataaattgtagttttttttttttgttttgttttttttactgtgatcTGACAATTTTCTGCACCAAACTTTGcataaaacaagaaaacaactcacaaaatgtaaaatagttgcaAACTGCAGAGAGATTGTGTCAATGTTTTTCTGTGGAATGCAAAAATAACacatttccttttcttcaaaaaaaaaaaaaaaaaaaaagcaaagtggGCAAAAGCAAGTGATATGGAAGACTTTAACCATTAAATGATAAAAAgcaactagattattaaagtttgaggacaaactttatggtggcttaaATAGCTGAGTCtaaaagtttgaagtggttttaaagtgtaaatagcatgttagtatgattctagcttgaattagcatgttactagcatgaattagcatgctgttagcatgattctagcatgaattagcaaattagcatgattctaccatggtttagcatgttgttagcatgtttctagcatgaatcagcttgtttctagcatgaattagcatgttgttagcatgaattagcatgatgttagcatgtttctaacaaaATTAGCATGTCAGTAGCATGTCAAAACTATTAGCATGTGTTAAAATAGCTAGTCATATTCTATGGAACAGACTGACTCTAGtgtgtaggacagtctgatgcaaagTTATGACCTCACAAAGGTTGactatgttaagtcaatggcagtcttttacaatagaagtctatgggacagttgctagggtgcaatAAGTGGTTGCtggggagtggctagtaagtttaaaggtcatcagtggttGGCTGCTGGCTAGTCtgagttaagcctggtttatacttctgcgtcaagtgaccggcgtaaccaacggcgcatgcaacgcacgtagctgtgcatttatacttctgtgcgctgtttctgttgttctgcattaacacttctataacgctagttggcagtgaggtgttcaTTTTCCtgtgtgtcgagtttctttgctgctgttttgttCTTCATGAACACTTCctaaatgtacaagtggctcaaactcgctcattttgaggcaggaaccggcggacgtgcaacaactttaactatgaggtaaacacaaaacaaaacttttcatctggagctccttcacggactccgcacttgtaaacaatcgctccatcgggctctcAGTCctgcccagacttgtcagcgctaccaagccgaccaatcacagagcttgcgctacgcgtcgttgc

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8104 Acts upstream of or within with a positive effect on positive regulation of oligodendrocyte differentiation. Is expressed in several structures, including heart; integument; liver; nervous system; and pleuroperitoneal region. Orthologous to human DHRS12 (dehydrogenase/reductase 12).

Ensembl:

ensembl_id ENSDARG00000010764

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017432 True 3341 mRNA 0.42 10 43166511 43198413

Neighbor

gene id symbol gene type direction distance location
XLOC_008773 NA coding upstream 66112 43092822 ~ 43100399 (+)
XLOC_008772 acsl3a coding upstream 87969 42995051 ~ 43078542 (+)
XLOC_008771 NA coding upstream 174863 42991400 ~ 42991648 (+)
XLOC_008770 slc8a2b coding upstream 185044 42767803 ~ 42981467 (+)
XLOC_008769 grik1b coding upstream 486673 42599501 ~ 42679838 (+)
XLOC_008775 NA coding downstream 5442 43203855 ~ 43208245 (+)
XLOC_008776 zgc:85932 coding downstream 134708 43333121 ~ 43389953 (+)
XLOC_008777 actn4 coding downstream 199904 43398317 ~ 43510872 (+)
XLOC_008778 tyr coding downstream 600845 43799258 ~ 43818697 (+)
XLOC_008779 CABZ01073033.1 coding downstream 630976 43829389 ~ 43829517 (+)
XLOC_008463 BX663520.1 misc upstream 21914229 21252191 ~ 21252282 (+)
XLOC_008768 NA non-coding upstream 569121 42595624 ~ 42597390 (+)
XLOC_008765 BX322538.1 non-coding upstream 851756 42314628 ~ 42314755 (+)
XLOC_008763 BX322538.2 non-coding upstream 885752 42262701 ~ 42280759 (+)
XLOC_008781 NA non-coding downstream 747307 43945720 ~ 43946407 (+)
XLOC_008783 NA non-coding downstream 867738 44066151 ~ 44070403 (+)
XLOC_008795 NA non-coding downstream 1287850 44486263 ~ 44488525 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000242_00457985_00464094 FLJ13639 misc CI01000242 null 456146 ~ 464094 (-)