CI01000030_03954516_03959210 (DOT1L)


Basic Information

Item Value
gene id CI01000030_03954516_03959210
gene name DOT1L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3954133 ~ 3959210 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03954516_03959210.mRNA
GATAAACATCATGATGCTGCACATGAAATCATCGAAACCATACGTTGGGTCTGTGAAGAGATCCCAGATCTTAAGCTGGCCATGGAGAACTACGTTCTTATCGACTACGACACCAAGAGTTTTGAGAGTATGCAGAGACTGTGTGATAAGTACAACAGAGCCATTGACAGCATTCACCAACTGTGGAAAGGGACCACCCAACCCATGAAACTGAACAAGCGGCCTTCCAACGGCCTGCTGCGTCACATCCTGCAGCAGGTCTACAACCACTCTGTCACCGACCCGGAGAAACTCAACAACTACGAGCCATTCTCTCCTGAGGTGTACGGAGAGACCTCCTTCGACCTGGTGGCCCAGATCATTGATGAGATGGAAATGATGGAAGAAGACACCTTTGTAGATTTGGGCAGTGGGGTTGGTCAAGTAGTCTTGCAGGTCGCTGCAGCCACCAACTGTAAACACTACTACGGCGTGGAGAAAGCAGACATTCCAGCAACCTATGCAGAGTCAATGGACAGAGAGTTTAAGAGGTGGATGAAGTGGTATGGCAAAAAACATGGCGAGTACACGTTGGAAAGGGGAGACTTCCTCTCAGAAGAATGGAAGGAACGAATAGCCAGCACAAGTGTTATTTTTGTGAATAACTTTGCCTTTGGTCCTGAGGTGGACCACCAGCTGAAGGAACGATTCGCCAACATGAAGGAAGGTGGAAAAATTGTATCCTCAAAACCTTTTGCACCTCTTAACTTCAGAATAAACAGCCGAAACTTGAGTGGTAAGTATAAAACTTTGCACAACAGGATTCCTCTACAAAAAGATGGTACCATTGTTAAAAATAAAAATACTATCATGATAGTGTTCTTAACTTTAAAAATATGATACTTGGTTCTTTTTTGTAAGTGTTAAAGAGATAATTCACCCAAAAATGAAAATTATCCCATGATTTACTCACCCTCAAGCCATCCTAGGTGTATATGACTTTCTTCTTTCAGATGAACACGATTCATATATTTGAAAATATCCTGTCTTTACCAAGCTTTATATTGGTAGTGAACGGGGGCCTGTTATGAAGGCCCAAAAAACAGCATTGTCATTAGTGTAGCAAAGCACCGCTTCAGTCACAGAAGTCACTTTCAATCCAAACAGCTTTCTGTTGGTGAACACGACAAATTCGCTTGAAAAATTTCAACACAATGCGAAATCTGCGTGGGGAAGTCTTTCAGCCTCACTCGAGTAGCAGTTTAAGATTGAAGTCCAATAAA

Function

symbol description
dot1l Predicted to enable histone methyltransferase activity (H3-K79 specific). Acts upstream of or within canonical Wnt signaling pathway and intestinal epithelial structure maintenance. Predicted to be active in nucleus. Is expressed in hindbrain; intestine; and midbrain. Human ortholog(s) of this gene implicated in mixed phenotype acute leukemia. Orthologous to human DOT1L (DOT1 like histone lysine methyltransferase).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K11427 DOT1L, DOT1; [histone H3]-lysine79 N-trimethyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03954516_03959210.mRNA True 1262 mRNA 0.43 9 3954133 3959210

Neighbor

gene id symbol gene type direction distance location
CI01000030_03943397_03953732 NA coding downstream 100 3942708 ~ 3954033 (-)
CI01000030_03927287_03932124 NA coding downstream 21969 3927227 ~ 3932164 (-)
CI01000030_03919724_03924153 OAZ1A coding downstream 29980 3919653 ~ 3924153 (-)
CI01000030_03906284_03908070 NA coding downstream 45361 3906099 ~ 3908772 (-)
CI01000030_03881956_03885985 NA coding downstream 68099 3881578 ~ 3886034 (-)
CI01000030_03977684_03994541 ELL coding upstream 16628 3975838 ~ 3994716 (-)
CI01000030_04012150_04013791 NA coding upstream 52930 4010930 ~ 4015095 (-)
CI01000030_04023756_04027078 NA coding upstream 64283 4023493 ~ 4027562 (-)
CI01000030_04036031_04051996 NA coding upstream 75399 4034609 ~ 4053117 (-)
CI01000030_04156234_04162950 TMEM59L coding upstream 196377 4155587 ~ 4162950 (-)
G160333 NA non-coding downstream 142778 3811090 ~ 3811355 (-)
G160332 NA non-coding downstream 143906 3809924 ~ 3810227 (-)
G160331 NA non-coding downstream 144379 3809424 ~ 3809754 (-)
G160263 NA non-coding downstream 295413 3657035 ~ 3658720 (-)
G160298 NA non-coding downstream 376551 3577378 ~ 3577582 (-)
G160351 NA non-coding upstream 10583 3969793 ~ 3970072 (-)
G160361 NA non-coding upstream 139055 4098265 ~ 4099115 (-)
G160376 NA non-coding upstream 155537 4114747 ~ 4114974 (-)
G160381 NA non-coding upstream 159718 4118928 ~ 4119136 (-)
CI01000030_03491770_03493119 CELF5A other downstream 461033 3490119 ~ 3493741 (-)
G160213 NA other downstream 484971 3466353 ~ 3469162 (-)
G158980 NA other downstream 1421569 2499584 ~ 2536375 (-)
G158914 NA other downstream 1502415 2450849 ~ 2451718 (-)
CI01000030_02155901_02157314 NA other downstream 1794842 2155584 ~ 2157390 (-)
G160713 NA other upstream 1459909 5419119 ~ 5423513 (-)
G160712 NA other upstream 1497750 5456960 ~ 5512074 (-)
G160949 NA other upstream 1838087 5797297 ~ 5800426 (-)
CI01000030_06131710_06138371 NA other upstream 2174165 6131090 ~ 6138406 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other upstream 2741845 6701055 ~ 6704745 (-)

Expression


Co-expression Network