CI01000030_06837243_06838315


Basic Information

Item Value
gene id CI01000030_06837243_06838315
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 6837110 ~ 6838523 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_06837243_06838315.mRNA
AAACCAAACATCATATGCTGTAGAGCAGACAAGAAGCTACAAATGTTAGTTCTCCAATCAGTTCACCAGGGTCCACCCACTTACACTTCCTCTGACTGATGTGGGAAAAATCTTTTTTTCTTTCTTTCTTTCTCATATCTTTGGTTCAGAGCTCTACAAAAGAGTTTAAATGGTGTGTGGATGGAGTGTTTTAATACACAGCAACAACATGAGGATCTTTCAGCTTTTTCTCTATGTATTAATCTGTTGTCAAGCAGCAGTAGCAGATCAACTAACTGATTTGGGATCAAATGTGACCATAAACTGTGATCTTGATAAAGATGAGGTTTATTGGATTTTACTGAAAACACCAGATCCTCCAACAGTGATTCTACGATCATTCCCAACACAACGATCACCTTTTTACTTTAATAAAACATTCAGAAAGAAATATTCAGTGCAATTTAAACATTGTCTGGTTATAAATAATGTGACTGTTGATGAATTAGGAGTTTATTACTGTATAAACACTGATACTCCTCCAAAATTCAGCAAAGGCACCAGACTGTACATCACCGAACCAGTTCAACCATCAGAGTGTCACAATCATACAGTGATTGAGTTTATTGATCAGAATCAAACACAATGTCAGATTATTATCATCATATCTGGTCTGATGATCGGGCTTCTGCTCATTGTGCTGATCGTGTTTGCTGTTGGAAAAACAGAACGGTTGGAAAAACACGTTCATGATGCTGATCTACTGCAGACACGAGTGATATATCAGCTTCAAGACCAAAACCAAATACTTTCACGATAAAGTACATCATGTGTAAGCATCAGAAATCATCAGTTTAGGACTGTATGAACACACACAGATTAAGCATCATTGTAACACGGTCTTTAATTTATCAAGTCTGGTGTGAAGACCTAGTTAATTTAGTTGCATTAAA

Function

NR:

description
Immunoglobulin light chain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_06837243_06838315.mRNA True 932 mRNA 0.36 4 6837110 6838523

Neighbor

gene id symbol gene type direction distance location
CI01000030_06825126_06834282 NA coding downstream 1966 6825073 ~ 6835144 (-)
CI01000030_06810754_06819241 XPNPEP1 coding downstream 17869 6810593 ~ 6819241 (-)
CI01000030_06747047_06752255 NA coding downstream 84855 6746960 ~ 6752411 (-)
CI01000030_06715403_06717267 HMOX2A coding downstream 119384 6714653 ~ 6717726 (-)
CI01000030_06705681_06711246 GDE1 coding downstream 125864 6705424 ~ 6711246 (-)
CI01000030_06841490_06848643 NA coding upstream 2549 6841072 ~ 6848659 (-)
CI01000030_06886173_06894325 NA coding upstream 47634 6886157 ~ 6894429 (-)
CI01000030_06919935_06930161 NA coding upstream 80890 6919413 ~ 6930328 (-)
CI01000030_06940324_06983295 NA coding upstream 101701 6940224 ~ 6983963 (-)
CI01000030_06985089_06988057 NA coding upstream 145734 6984257 ~ 6988104 (-)
G161519 NA non-coding downstream 237253 6594369 ~ 6599857 (-)
G161522 NA non-coding downstream 282611 6551771 ~ 6554499 (-)
G161399 NA non-coding downstream 582371 6248834 ~ 6254739 (-)
G161395 NA non-coding downstream 591092 6245801 ~ 6246018 (-)
G161394 NA non-coding downstream 592410 6244454 ~ 6244700 (-)
G163043 NA non-coding upstream 28562 6867085 ~ 6867895 (-)
G163053 NA non-coding upstream 61421 6899944 ~ 6900921 (-)
G163070 NA non-coding upstream 105622 6944145 ~ 6944501 (-)
G163033 NA non-coding upstream 123540 6962063 ~ 6962326 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other downstream 132365 6701055 ~ 6704745 (-)
CI01000030_06131710_06138371 NA other downstream 698704 6131090 ~ 6138406 (-)
G160949 NA other downstream 1036684 5797297 ~ 5800426 (-)
G160712 NA other downstream 1325036 5456960 ~ 5512074 (-)
G163065 NA other upstream 85960 6924483 ~ 6925657 (-)
G163139 NA other upstream 310951 7149474 ~ 7150144 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other upstream 896913 7735436 ~ 7737720 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other upstream 950274 7788797 ~ 7792198 (-)
CI01000030_08185866_08194632 NA other upstream 1353396 8184897 ~ 8197266 (-)

Expression


Co-expression Network